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    Dbndd2 dysbindin domain containing 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 499941, updated on 2-Nov-2024

    Summary

    Official Symbol
    Dbndd2provided by RGD
    Official Full Name
    dysbindin domain containing 2provided by RGD
    Primary source
    RGD:1559521
    See related
    EnsemblRapid:ENSRNOG00000087784 AllianceGenome:RGD:1559521
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be involved in negative regulation of protein kinase activity and regulation of signal transduction. Predicted to be located in cytosol. Orthologous to human DBNDD2 (dysbindin domain containing 2). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Brain (RPKM 292.7), Muscle (RPKM 150.3) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Dbndd2 in Genome Data Viewer
    Location:
    3q42
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (173634551..173639999)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (153216300..153220651)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (160933833..160938468)

    Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene syndecan 4 Neighboring gene Sys1 golgi trafficking protein Neighboring gene TP53 target 5 Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class T Neighboring gene uncharacterized LOC120101784

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    dysbindin domain-containing protein 2
    Names
    SCF apoptosis response protein 1
    dysbindin (dystrobrevin binding protein 1) domain containing 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001047111.2NP_001040576.1  dysbindin domain-containing protein 2

      See identical proteins and their annotated locations for NP_001040576.1

      Status: PROVISIONAL

      Source sequence(s)
      BC158561
      UniProtKB/TrEMBL
      A0A8I5ZPL9, A6JX90, A6JX91, Q331S7
      Related
      ENSRNOP00000096565.2, ENSRNOT00000107125.2
      Conserved Domains (1) summary
      pfam04440
      Location:12107
      Dysbindin; Dysbindin (Dystrobrevin binding protein 1)
    2. NM_001429173.1NP_001416102.1  dysbindin domain-containing protein 2

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000003
      UniProtKB/TrEMBL
      A6JX90, A6JX91, Q331S7

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086021.1 Reference GRCr8

      Range
      173634551..173639999
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006235614.5XP_006235676.2  dysbindin domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8I6AU01
      Related
      ENSRNOP00000099032.1, ENSRNOT00000132829.1