U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Vom1r3 vomeronasal 1 receptor 3 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 494237, updated on 17-Aug-2024

    Summary

    Symbol
    Vom1r3provided by RGD
    Full Name
    vomeronasal 1 receptor 3provided by RGD
    Primary source
    RGD:1359495
    See related
    AllianceGenome:RGD:1359495
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    V1re25
    Summary
    Predicted to enable pheromone receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and response to pheromone. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human VN1R3 (vomeronasal 1 receptor 3). [provided by Alliance of Genome Resources, Apr 2022]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Vom1r3 in Genome Data Viewer
    Location:
    1q12
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (68036881..68037777)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (59363865..59364761)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (86429262..86430158)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene vomeronasal type-2 receptor 116-like Neighboring gene vomeronasal 1 receptor 2 Neighboring gene vomeronasal 1 receptor 4 Neighboring gene vomeronasal 1 receptor pseudogene 7

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables pheromone receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to pheromone IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sensory perception of chemical stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    vomeronasal 1 receptor 3; vomeronasal type-1 receptor 4
    Names
    vomernasal 1 receptor Vom1r3
    vomeronasal 1 receptor, E25
    vomeronasal V1r-type receptor V1re25

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      68036881..68037777
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039097009.1XP_038952937.1  vomeronasal type-1 receptor 4

      UniProtKB/TrEMBL
      A0A8I6AA92
      Conserved Domains (2) summary
      cd14964
      Location:732
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:7297
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001009517.1: Suppressed sequence

      Description
      NM_001009517.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.