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    RAD51B RAD51 paralog B [ Canis lupus familiaris (dog) ]

    Gene ID: 490746, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RAD51Bprovided by VGNC
    Official Full Name
    RAD51 paralog Bprovided by VGNC
    Primary source
    VGNC:VGNC:82294
    See related
    Ensembl:ENSCAFG00845003641
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    RAD51L1
    Orthologs
    human mouse all
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    Genomic context

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    See RAD51B in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (42009371..42691934)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (41469217..42151951)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (42056861..42740806)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (41624025..42306963)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (41699024..42381539)

    Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene hsc70-interacting protein-like Neighboring gene zinc finger FYVE-type containing 26 Neighboring gene uncharacterized LOC111097084 Neighboring gene uncharacterized LOC119872881 Neighboring gene syntaxin-8-like Neighboring gene uncharacterized LOC111097083

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent DNA damage sensor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Rad51B-Rad51C-Rad51D-XRCC2 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA repair protein RAD51 homolog 2
    Names
    RAD51 homolog B
    RAD51-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051812.1 Reference ROS_Cfam_1.0

      Range
      42009371..42691934
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038673965.1 → XP_038529893.1  DNA repair protein RAD51 homolog 2 isoform X4

      UniProtKB/TrEMBL
      A0A8C0SHB1, A0A8I3N661
      Conserved Domains (1) summary
      cd19493
      Location:91 → 327
      Rad51B; RAD51B recombinase

    2. XM_038673962.1 → XP_038529890.1  DNA repair protein RAD51 homolog 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0SHB1, A0A8I3N661
      Conserved Domains (1) summary
      cd19493
      Location:105 → 341
      Rad51B; RAD51B recombinase

    3. XM_038673964.1 → XP_038529892.1  DNA repair protein RAD51 homolog 2 isoform X3

      UniProtKB/TrEMBL
      A0A8C0SHB1, A0A8I3N661
      Related
      ENSCAFP00845005187.1, ENSCAFT00845006517.1
      Conserved Domains (1) summary
      cd19493
      Location:105 → 341
      Rad51B; RAD51B recombinase

    4. XM_038673963.1 → XP_038529891.1  DNA repair protein RAD51 homolog 2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0SHB1, A0A8I3N661
      Conserved Domains (1) summary
      cd19493
      Location:105 → 341
      Rad51B; RAD51B recombinase

    5. XM_038673966.1 → XP_038529894.1  DNA repair protein RAD51 homolog 2 isoform X5

      UniProtKB/TrEMBL
      A0A8C0JWW3, A0A8C0NH10, A0A8I3MR66
      Conserved Domains (1) summary
      cl38936
      Location:105 → 266
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    6. XM_038673967.1 → XP_038529895.1  DNA repair protein RAD51 homolog 2 isoform X6

      UniProtKB/TrEMBL
      A0A8C0SHB1, A0A8I3N661
      Conserved Domains (1) summary
      cd19493
      Location:39 → 275
      Rad51B; RAD51B recombinase

    RNA

    1. XR_005431151.1 RNA Sequence

    2. XR_005431148.1 RNA Sequence

    3. XR_005431149.1 RNA Sequence

    4. XR_005431150.1 RNA Sequence

    5. XR_005431152.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049268.1 Alternate UMICH_Zoey_3.1

      Range
      41624025..42306963
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038483575.1 → XP_038339503.1  DNA repair protein RAD51 homolog 2 isoform X4

      Conserved Domains (1) summary
      cd19493
      Location:91 → 327
      Rad51B; RAD51B recombinase

    2. XM_038483574.1 → XP_038339502.1  DNA repair protein RAD51 homolog 2 isoform X4

      Conserved Domains (1) summary
      cd19493
      Location:91 → 327
      Rad51B; RAD51B recombinase

    3. XM_038483571.1 → XP_038339499.1  DNA repair protein RAD51 homolog 2 isoform X1

      Conserved Domains (1) summary
      cd19493
      Location:105 → 341
      Rad51B; RAD51B recombinase

    4. XM_038483573.1 → XP_038339501.1  DNA repair protein RAD51 homolog 2 isoform X3

      Conserved Domains (1) summary
      cd19493
      Location:105 → 341
      Rad51B; RAD51B recombinase

    5. XM_038483572.1 → XP_038339500.1  DNA repair protein RAD51 homolog 2 isoform X2

      Conserved Domains (1) summary
      cd19493
      Location:105 → 341
      Rad51B; RAD51B recombinase

    6. XM_038483576.1 → XP_038339504.1  DNA repair protein RAD51 homolog 2 isoform X5

      Conserved Domains (1) summary
      cl38936
      Location:105 → 266
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    7. XM_038483577.1 → XP_038339505.1  DNA repair protein RAD51 homolog 2 isoform X6

      Conserved Domains (1) summary
      cd19493
      Location:39 → 275
      Rad51B; RAD51B recombinase

    RNA

    1. XR_005329563.1 RNA Sequence

    2. XR_005329560.1 RNA Sequence

    3. XR_005329561.1 RNA Sequence

    4. XR_005329562.1 RNA Sequence

    5. XR_005329564.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

      Range
      41699024..42381539
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038609152.1 → XP_038465080.1  DNA repair protein RAD51 homolog 2 isoform X4

      Conserved Domains (1) summary
      cd19493
      Location:91 → 327
      Rad51B; RAD51B recombinase

    2. XM_038609149.1 → XP_038465077.1  DNA repair protein RAD51 homolog 2 isoform X1

      Conserved Domains (1) summary
      cd19493
      Location:105 → 341
      Rad51B; RAD51B recombinase

    3. XM_038609151.1 → XP_038465079.1  DNA repair protein RAD51 homolog 2 isoform X3

      Conserved Domains (1) summary
      cd19493
      Location:105 → 341
      Rad51B; RAD51B recombinase

    4. XM_038609150.1 → XP_038465078.1  DNA repair protein RAD51 homolog 2 isoform X2

      Conserved Domains (1) summary
      cd19493
      Location:105 → 341
      Rad51B; RAD51B recombinase

    5. XM_038609153.1 → XP_038465081.1  DNA repair protein RAD51 homolog 2 isoform X5

      Conserved Domains (1) summary
      cl38936
      Location:105 → 266
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    6. XM_038609154.1 → XP_038465082.1  DNA repair protein RAD51 homolog 2 isoform X6

      Conserved Domains (1) summary
      cd19493
      Location:39 → 275
      Rad51B; RAD51B recombinase

    RNA

    1. XR_005397903.1 RNA Sequence

    2. XR_005397900.1 RNA Sequence

    3. XR_005397901.1 RNA Sequence

    4. XR_005397902.1 RNA Sequence

    5. XR_005397904.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

      Range
      42056861..42740806
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038545044.1 → XP_038400972.1  DNA repair protein RAD51 homolog 2 isoform X4

      UniProtKB/TrEMBL
      A0A8C0SHB1, A0A8I3N661
      Conserved Domains (1) summary
      cd19493
      Location:91 → 327
      Rad51B; RAD51B recombinase

    2. XM_038545043.1 → XP_038400971.1  DNA repair protein RAD51 homolog 2 isoform X4

      UniProtKB/TrEMBL
      A0A8C0SHB1, A0A8I3N661
      Conserved Domains (1) summary
      cd19493
      Location:91 → 327
      Rad51B; RAD51B recombinase

    3. XM_038545040.1 → XP_038400968.1  DNA repair protein RAD51 homolog 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0SHB1, A0A8I3N661
      Conserved Domains (1) summary
      cd19493
      Location:105 → 341
      Rad51B; RAD51B recombinase

    4. XM_038545042.1 → XP_038400970.1  DNA repair protein RAD51 homolog 2 isoform X3

      UniProtKB/TrEMBL
      A0A8C0SHB1, A0A8I3N661
      Conserved Domains (1) summary
      cd19493
      Location:105 → 341
      Rad51B; RAD51B recombinase

    5. XM_038545041.1 → XP_038400969.1  DNA repair protein RAD51 homolog 2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0SHB1, A0A8I3N661
      Conserved Domains (1) summary
      cd19493
      Location:105 → 341
      Rad51B; RAD51B recombinase

    6. XM_038545045.1 → XP_038400973.1  DNA repair protein RAD51 homolog 2 isoform X5

      UniProtKB/TrEMBL
      A0A8C0JWW3, A0A8C0NH10, A0A8I3MR66
      Conserved Domains (1) summary
      cl38936
      Location:105 → 266
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    7. XM_038545046.1 → XP_038400974.1  DNA repair protein RAD51 homolog 2 isoform X6

      UniProtKB/TrEMBL
      A0A8C0SHB1, A0A8I3N661
      Conserved Domains (1) summary
      cd19493
      Location:39 → 275
      Rad51B; RAD51B recombinase

    RNA

    1. XR_005363452.1 RNA Sequence

    2. XR_005363449.1 RNA Sequence

    3. XR_005363450.1 RNA Sequence

    4. XR_005363451.1 RNA Sequence

    5. XR_005363453.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      41469217..42151951
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038589739.1 → XP_038445667.1  DNA repair protein RAD51 homolog 2 isoform X4

      UniProtKB/TrEMBL
      A0A8C0SHB1, A0A8I3N661
      Conserved Domains (1) summary
      cd19493
      Location:91 → 327
      Rad51B; RAD51B recombinase

    2. XM_038589734.1 → XP_038445662.1  DNA repair protein RAD51 homolog 2 isoform X4

      UniProtKB/TrEMBL
      A0A8C0SHB1, A0A8I3N661
      Conserved Domains (1) summary
      cd19493
      Location:91 → 327
      Rad51B; RAD51B recombinase

    3. XM_038589716.1 → XP_038445644.1  DNA repair protein RAD51 homolog 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0SHB1, A0A8I3N661
      Conserved Domains (1) summary
      cd19493
      Location:105 → 341
      Rad51B; RAD51B recombinase

    4. XM_005623565.4 → XP_005623622.1  DNA repair protein RAD51 homolog 2 isoform X3

      UniProtKB/TrEMBL
      A0A8C0SHB1, A0A8I3N661
      Conserved Domains (1) summary
      cd19493
      Location:105 → 341
      Rad51B; RAD51B recombinase

    5. XM_005623564.4 → XP_005623621.1  DNA repair protein RAD51 homolog 2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0SHB1, A0A8I3N661
      Conserved Domains (1) summary
      cd19493
      Location:105 → 341
      Rad51B; RAD51B recombinase

    6. XM_022422160.2 → XP_022277868.1  DNA repair protein RAD51 homolog 2 isoform X5

      UniProtKB/TrEMBL
      A0A8C0JWW3, A0A8C0NH10, A0A8I3MR66
      Conserved Domains (1) summary
      cl38936
      Location:105 → 266
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    7. XM_038589745.1 → XP_038445673.1  DNA repair protein RAD51 homolog 2 isoform X6

      UniProtKB/TrEMBL
      A0A8C0SHB1, A0A8I3N661
      Conserved Domains (1) summary
      cd19493
      Location:39 → 275
      Rad51B; RAD51B recombinase

    RNA

    1. XR_005387535.1 RNA Sequence

    2. XR_005387527.1 RNA Sequence

    3. XR_005387532.1 RNA Sequence

    4. XR_005387533.1 RNA Sequence

    5. XR_002629256.2 RNA Sequence

    Nucleotide Protein
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