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    B4GALT6 beta-1,4-galactosyltransferase 6 [ Canis lupus familiaris (dog) ]

    Gene ID: 490499, updated on 17-Aug-2024

    Summary

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    Official Symbol
    B4GALT6provided by VGNC
    Official Full Name
    beta-1,4-galactosyltransferase 6provided by VGNC
    Primary source
    VGNC:VGNC:38354
    See related
    Ensembl:ENSCAFG00845010375
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See B4GALT6 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 7 NC_051811.1 (57834554..57902751)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 7 NC_006589.4 (57286934..57354734)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 7 NC_049228.1 (57826294..57894519)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 7 NC_049267.1 (57511630..57579326)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 7 NC_049748.1 (57537715..57605342)

    Chromosome 7 - NC_051811.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119876454 Neighboring gene trafficking protein particle complex subunit 8 Neighboring gene uncharacterized LOC111096784 Neighboring gene transthyretin Neighboring gene desmoglein 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glycosphingolipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta-1,4-galactosyltransferase 6
    XP_022277215.1
    XP_038338097.1
    XP_038338098.1
    XP_038338099.1
    XP_038338100.1
    XP_038399529.1
    XP_038399530.1
    XP_038399531.1
    XP_038399532.1
    XP_038431528.1
    XP_038431555.1
    XP_038463651.1
    XP_038463652.1
    XP_038463654.1
    XP_038463655.1
    XP_038528332.1
    XP_038528333.1
    XP_038528334.1
    XP_038528335.1
    XP_547621.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051811.1 Reference ROS_Cfam_1.0

      Range
      57834554..57902751
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038672404.1 → XP_038528332.1  beta-1,4-galactosyltransferase 6 isoform X1

      UniProtKB/TrEMBL
      A0A8C0RA34, A0A8I3NFU6
      Related
      ENSCAFP00845014262.1, ENSCAFT00845018279.1
      Conserved Domains (1) summary
      cd00899
      Location:248 → 464
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    2. XM_038672406.1 → XP_038528334.1  beta-1,4-galactosyltransferase 6 isoform X3

      UniProtKB/TrEMBL
      A0A8C0SE63
      Related
      ENSCAFP00845014334.1, ENSCAFT00845018362.1
      Conserved Domains (1) summary
      cd00899
      Location:216 → 432
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    3. XM_038672405.1 → XP_038528333.1  beta-1,4-galactosyltransferase 6 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KJT1, A0A8C0R060, A0A8C0SE64, A0A8C0SED2, A0A8I3NRE3, A0A8I3RXZ1, A0A8P0NUP6, A0A8P0PP64
      Related
      ENSCAFP00845014404.1, ENSCAFT00845018453.1
      Conserved Domains (1) summary
      cd00899
      Location:155 → 371
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    4. XM_038672407.1 → XP_038528335.1  beta-1,4-galactosyltransferase 6 isoform X4

      UniProtKB/TrEMBL
      A0A8C0LY26, A0A8I3NHG1
      Related
      ENSCAFP00845014464.1, ENSCAFT00845018541.1
      Conserved Domains (1) summary
      cd00899
      Location:132 → 348
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049267.1 Alternate UMICH_Zoey_3.1

      Range
      57511630..57579326
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038482169.1 → XP_038338097.1  beta-1,4-galactosyltransferase 6 isoform X1

      Conserved Domains (1) summary
      cd00899
      Location:248 → 464
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    2. XM_038482171.1 → XP_038338099.1  beta-1,4-galactosyltransferase 6 isoform X3

    3. XM_038482170.1 → XP_038338098.1  beta-1,4-galactosyltransferase 6 isoform X2

      Conserved Domains (1) summary
      cd00899
      Location:155 → 371
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    4. XM_038482172.1 → XP_038338100.1  beta-1,4-galactosyltransferase 6 isoform X4

      Conserved Domains (1) summary
      cd00899
      Location:132 → 348
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049748.1 Alternate UNSW_CanFamBas_1.0

      Range
      57537715..57605342
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038607723.1 → XP_038463651.1  beta-1,4-galactosyltransferase 6 isoform X1

      Conserved Domains (1) summary
      cd00899
      Location:248 → 464
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    2. XM_038607726.1 → XP_038463654.1  beta-1,4-galactosyltransferase 6 isoform X3

      Conserved Domains (1) summary
      cd00899
      Location:216 → 432
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    3. XM_038607724.1 → XP_038463652.1  beta-1,4-galactosyltransferase 6 isoform X2

      Conserved Domains (1) summary
      cd00899
      Location:155 → 371
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    4. XM_038607727.1 → XP_038463655.1  beta-1,4-galactosyltransferase 6 isoform X4

      Conserved Domains (1) summary
      cd00899
      Location:132 → 348
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049228.1 Alternate UU_Cfam_GSD_1.0

      Range
      57826294..57894519
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038543601.1 → XP_038399529.1  beta-1,4-galactosyltransferase 6 isoform X1

      UniProtKB/TrEMBL
      A0A8C0RA34, A0A8I3NFU6
      Conserved Domains (1) summary
      cd00899
      Location:248 → 464
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    2. XM_038543603.1 → XP_038399531.1  beta-1,4-galactosyltransferase 6 isoform X3

      UniProtKB/TrEMBL
      A0A8C0SE63
      Conserved Domains (1) summary
      cd00899
      Location:216 → 432
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    3. XM_038543602.1 → XP_038399530.1  beta-1,4-galactosyltransferase 6 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KJT1, A0A8C0R060, A0A8C0SE64, A0A8C0SED2, A0A8I3NRE3, A0A8I3RXZ1, A0A8P0NUP6, A0A8P0PP64
      Conserved Domains (1) summary
      cd00899
      Location:155 → 371
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    4. XM_038543604.1 → XP_038399532.1  beta-1,4-galactosyltransferase 6 isoform X4

      UniProtKB/TrEMBL
      A0A8C0LY26, A0A8I3NHG1
      Conserved Domains (1) summary
      cd00899
      Location:132 → 348
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006589.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      57286934..57354734
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038575600.1 → XP_038431528.1  beta-1,4-galactosyltransferase 6 isoform X1

      UniProtKB/TrEMBL
      A0A8C0RA34, A0A8I3NFU6
      Conserved Domains (1) summary
      cd00899
      Location:248 → 464
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    2. XM_022421507.2 → XP_022277215.1  beta-1,4-galactosyltransferase 6 isoform X3

      UniProtKB/TrEMBL
      A0A8C0SE63
      Conserved Domains (1) summary
      cd00899
      Location:216 → 432
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    3. XM_547621.7 → XP_547621.2  beta-1,4-galactosyltransferase 6 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KJT1, A0A8C0R060, A0A8C0SE64, A0A8C0SED2, A0A8I3NRE3, A0A8I3RXZ1, A0A8P0NUP6, A0A8P0PP64
      Conserved Domains (1) summary
      cd00899
      Location:155 → 371
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    4. XM_038575627.1 → XP_038431555.1  beta-1,4-galactosyltransferase 6 isoform X4

      UniProtKB/TrEMBL
      A0A8C0LY26, A0A8I3NHG1
      Conserved Domains (1) summary
      cd00899
      Location:132 → 348
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
    Nucleotide Protein
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