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    GAL3ST4 galactose-3-O-sulfotransferase 4 [ Canis lupus familiaris (dog) ]

    Gene ID: 489843, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GAL3ST4provided by VGNC
    Official Full Name
    galactose-3-O-sulfotransferase 4provided by VGNC
    Primary source
    VGNC:VGNC:54026
    See related
    Ensembl:ENSCAFG00845002407
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See GAL3ST4 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (9295534..9301455)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (11065846..11071767)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (9308137..9314064)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (9147990..9153939)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (9127052..9133001)

    Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene STAG3 cohesin complex component Neighboring gene U6 spliceosomal RNA Neighboring gene glypican 2 Neighboring gene trafficking protein particle complex subunit 14 Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables galactosylceramide sulfotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glycolipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    galactose-3-O-sulfotransferase 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051810.1 Reference ROS_Cfam_1.0

      Range
      9295534..9301455
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038668097.1 → XP_038524025.1  galactose-3-O-sulfotransferase 4

      UniProtKB/TrEMBL
      A0A8C0RNM2, A0A8C0STW4, A0A8I3MFA9
      Related
      ENSCAFP00845003393.1, ENSCAFT00845004251.1
      Conserved Domains (1) summary
      cl22970
      Location:1 → 470
      Sulfotransfer_2; Sulfotransferase family

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049266.1 Alternate UMICH_Zoey_3.1

      Range
      9147990..9153939
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038478025.1 → XP_038333953.1  galactose-3-O-sulfotransferase 4

      Conserved Domains (1) summary
      cl22970
      Location:1 → 470
      Sulfotransfer_2; Sulfotransferase family

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

      Range
      9127052..9133001
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038603393.1 → XP_038459321.1  galactose-3-O-sulfotransferase 4

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

      Range
      9308137..9314064
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038539304.1 → XP_038395232.1  galactose-3-O-sulfotransferase 4

      UniProtKB/TrEMBL
      A0A8C0RNM2, A0A8C0STW4, A0A8I3MFA9
      Conserved Domains (1) summary
      cl22970
      Location:1 → 470
      Sulfotransfer_2; Sulfotransferase family

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      11065846..11071767
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_546961.7 → XP_546961.2  galactose-3-O-sulfotransferase 4

      UniProtKB/TrEMBL
      A0A8C0RNM2, A0A8C0STW4, A0A8I3MFA9
      Conserved Domains (1) summary
      cl22970
      Location:1 → 470
      Sulfotransfer_2; Sulfotransferase family
    Nucleotide Protein
    Heading Accession and Version

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