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    KCNIP1 potassium voltage-gated channel interacting protein 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 489125, updated on 17-Aug-2024

    Summary

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    Official Symbol
    KCNIP1provided by VGNC
    Official Full Name
    potassium voltage-gated channel interacting protein 1provided by VGNC
    Primary source
    VGNC:VGNC:42254
    See related
    Ensembl:ENSCAFG00845002324
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See KCNIP1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 4 NC_051808.1 (41602547..41942922, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 4 NC_006586.4 (41172875..41519111, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 4 NC_049225.1 (42117879..42457557, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 4 NC_049264.1 (41416697..41625830, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 4 NC_049745.1 (41607074..41947032, complement)

    Chromosome 4 - NC_051808.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S19-like Neighboring gene gamma-aminobutyric acid type A receptor subunit pi Neighboring gene uncharacterized LOC102152044 Neighboring gene uncharacterized LOC102151981 Neighboring gene potassium calcium-activated channel subfamily M regulatory beta subunit 1 Neighboring gene uncharacterized LOC111095547 Neighboring gene lymphocyte cytosolic protein 2 Neighboring gene chromosome 4 C5orf58 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables potassium channel regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane transporter binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of potassium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of voltage-gated potassium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Kv channel-interacting protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051808.1 Reference ROS_Cfam_1.0

      Range
      41602547..41942922 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038663387.1 → XP_038519315.1  Kv channel-interacting protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0JV42, A0A8C0R9L6, A0A8I3N233
      Related
      ENSCAFP00845003436.1, ENSCAFT00845004306.1
      Conserved Domains (1) summary
      COG5126
      Location:48 → 214
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    2. XM_038663388.1 → XP_038519316.1  Kv channel-interacting protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0LVF8, A0A8C0QVM4, A0A8I3RQR1, A0A8P0PL98
      Related
      ENSCAFP00845003511.1, ENSCAFT00845004392.1
      Conserved Domains (1) summary
      COG5126
      Location:39 → 205
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    3. XM_038663385.1 → XP_038519313.1  Kv channel-interacting protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0JV33, A0A8C0R9L8, A0A8I3RQQ7, A0A8I3RS76, A0A8P0TIY2
      Related
      ENSCAFP00845003450.1, ENSCAFT00845004321.1
      Conserved Domains (1) summary
      COG5126
      Location:50 → 216
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    4. XM_038663384.1 → XP_038519312.1  Kv channel-interacting protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0JV42, A0A8I3N263
      Related
      ENSCAFP00845003472.1, ENSCAFT00845004348.1
      Conserved Domains (1) summary
      COG5126
      Location:55 → 221
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    RNA

    1. XR_005425821.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049264.1 Alternate UMICH_Zoey_3.1

      Range
      41416697..41625830 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_005324418.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049745.1 Alternate UNSW_CanFamBas_1.0

      Range
      41607074..41947032 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038599081.1 → XP_038455009.1  Kv channel-interacting protein 1 isoform X3

      Conserved Domains (1) summary
      COG5126
      Location:48 → 214
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    2. XM_038599082.1 → XP_038455010.1  Kv channel-interacting protein 1 isoform X4

      Conserved Domains (1) summary
      COG5126
      Location:39 → 205
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    3. XM_038599080.1 → XP_038455008.1  Kv channel-interacting protein 1 isoform X2

      Conserved Domains (1) summary
      COG5126
      Location:50 → 216
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    4. XM_038599079.1 → XP_038455007.1  Kv channel-interacting protein 1 isoform X1

      Conserved Domains (1) summary
      COG5126
      Location:55 → 221
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    RNA

    1. XR_005392715.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049225.1 Alternate UU_Cfam_GSD_1.0

      Range
      42117879..42457557 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038534781.1 → XP_038390709.1  Kv channel-interacting protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0JV42, A0A8C0R9L6, A0A8I3N233
      Conserved Domains (1) summary
      COG5126
      Location:48 → 214
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    2. XM_038534782.1 → XP_038390710.1  Kv channel-interacting protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0LVF8, A0A8C0QVM4, A0A8I3RQR1, A0A8P0PL98
      Conserved Domains (1) summary
      COG5126
      Location:39 → 205
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    3. XM_038534780.1 → XP_038390708.1  Kv channel-interacting protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0JV33, A0A8C0R9L8, A0A8I3RQQ7, A0A8I3RS76, A0A8P0TIY2
      Conserved Domains (1) summary
      COG5126
      Location:50 → 216
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    4. XM_038534779.1 → XP_038390707.1  Kv channel-interacting protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0JV42, A0A8I3N263
      Conserved Domains (1) summary
      COG5126
      Location:55 → 221
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    RNA

    1. XR_005358202.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006586.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      41172875..41519111 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038495204.1 → XP_038351132.1  Kv channel-interacting protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0JV42, A0A8C0R9L6, A0A8I3N233
      Conserved Domains (1) summary
      COG5126
      Location:48 → 214
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    2. XM_038495206.1 → XP_038351134.1  Kv channel-interacting protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0LVF8, A0A8C0QVM4, A0A8I3RQR1, A0A8P0PL98
      Conserved Domains (1) summary
      COG5126
      Location:39 → 205
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    3. XM_038495197.1 → XP_038351125.1  Kv channel-interacting protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0JV33, A0A8C0R9L8, A0A8I3RQQ7, A0A8I3RS76, A0A8P0TIY2
      Conserved Domains (1) summary
      COG5126
      Location:50 → 216
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    4. XM_038495189.1 → XP_038351117.1  Kv channel-interacting protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0JV42, A0A8I3N263
      Conserved Domains (1) summary
      COG5126
      Location:55 → 221
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    RNA

    1. XR_005336053.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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