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    SCD5 stearoyl-CoA desaturase 5 [ Canis lupus familiaris (dog) ]

    Gene ID: 487831, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SCD5provided by VGNC
    Official Full Name
    stearoyl-CoA desaturase 5provided by VGNC
    Primary source
    VGNC:VGNC:45901
    See related
    Ensembl:ENSCAFG00845019428
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See SCD5 in Genome Data Viewer
    Location:
    chromosome: 32
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 32 NC_051836.1 (6615984..6766611, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 32 NC_006614.4 (35139305..35289125)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 32 NC_049253.1 (33260063..33410889)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 32 NC_049292.1 (6687486..6837460, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 32 NC_049773.1 (6555633..6706287, complement)

    Chromosome 32 - NC_051836.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 150C Neighboring gene uncharacterized LOC119867145 Neighboring gene uncharacterized LOC111093583 Neighboring gene uncharacterized LOC111093582 Neighboring gene uncharacterized LOC119867176 Neighboring gene uncharacterized LOC119867175 Neighboring gene 60S ribosomal protein L31-like Neighboring gene U6 spliceosomal RNA Neighboring gene SEC31 homolog A, COPII coat complex component

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    stearoyl-CoA desaturase 5
    XP_038299907.1
    XP_038374307.1
    XP_038438211.1
    XP_038502249.1
    XP_544953.3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051836.1 Reference ROS_Cfam_1.0

      Range
      6615984..6766611 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038443979.1 → XP_038299907.1  stearoyl-CoA desaturase 5

      UniProtKB/TrEMBL
      A0A8C0KCP7, A0A8C0TNM8, A0A8I3S130
      Related
      ENSCAFP00845026819.1, ENSCAFT00845034263.1
      Conserved Domains (1) summary
      cd03505
      Location:63 → 303
      Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049292.1 Alternate UMICH_Zoey_3.1

      Range
      6687486..6837460 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038518379.1 → XP_038374307.1  stearoyl-CoA desaturase 5

      Conserved Domains (1) summary
      cd03505
      Location:63 → 303
      Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049773.1 Alternate UNSW_CanFamBas_1.0

      Range
      6555633..6706287 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038646321.1 → XP_038502249.1  stearoyl-CoA desaturase 5

      Conserved Domains (1) summary
      cd03505
      Location:63 → 303
      Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049253.1 Alternate UU_Cfam_GSD_1.0

      Range
      33260063..33410889
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038582283.1 → XP_038438211.1  stearoyl-CoA desaturase 5

      UniProtKB/TrEMBL
      A0A8C0KCP7, A0A8C0TNM8, A0A8I3S130
      Conserved Domains (1) summary
      cd03505
      Location:63 → 303
      Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006614.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      35139305..35289125
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_544953.7 → XP_544953.3  stearoyl-CoA desaturase 5

      UniProtKB/TrEMBL
      A0A8C0KCP7, A0A8C0TNM8, A0A8I3S130
      Conserved Domains (1) summary
      cd03505
      Location:63 → 303
      Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...
    Nucleotide Protein
    Heading Accession and Version

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