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    SNUPN snurportin 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 487655, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SNUPNprovided by VGNC
    Official Full Name
    snurportin 1provided by VGNC
    Primary source
    VGNC:VGNC:46618
    See related
    Ensembl:ENSCAFG00845020580
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See SNUPN in Genome Data Viewer
    Location:
    chromosome: 30
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 30 NC_051834.1 (38606443..38630072, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 30 NC_006612.4 (38331424..38354995, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 30 NC_049251.1 (38840276..38863881, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 30 NC_049290.1 (38558080..38581589, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 30 NC_049771.1 (38602795..38626664, complement)

    Chromosome 30 - NC_051834.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111093280 Neighboring gene SIN3 transcription regulator family member A Neighboring gene uncharacterized LOC119866946 Neighboring gene protein tyrosine phosphatase non-receptor type 9 Neighboring gene IMP U3 small nucleolar ribonucleoprotein 3 Neighboring gene sorting nexin 33

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nuclear import signal receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in snRNA import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    snurportin-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051834.1 Reference ROS_Cfam_1.0

      Range
      38606443..38630072 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038443008.1 → XP_038298936.1  snurportin-1

      UniProtKB/TrEMBL
      A0A8C0MLF2, A0A8C0TCK9, A0A8I3P521
      Conserved Domains (2) summary
      cd09232
      Location:98 → 282
      Snurportin-1_C; C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1
      pfam11538
      Location:25 → 64
      Snurportin1

    2. XM_038443006.1 → XP_038298934.1  snurportin-1

      UniProtKB/TrEMBL
      A0A8C0MLF2, A0A8C0TCK9, A0A8I3P521
      Conserved Domains (2) summary
      cd09232
      Location:98 → 282
      Snurportin-1_C; C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1
      pfam11538
      Location:25 → 64
      Snurportin1

    3. XM_038443009.1 → XP_038298937.1  snurportin-1

      UniProtKB/TrEMBL
      A0A8C0MLF2, A0A8C0TCK9, A0A8I3P521
      Conserved Domains (2) summary
      cd09232
      Location:98 → 282
      Snurportin-1_C; C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1
      pfam11538
      Location:25 → 64
      Snurportin1

    4. XM_038443007.1 → XP_038298935.1  snurportin-1

      UniProtKB/TrEMBL
      A0A8C0MLF2, A0A8C0TCK9, A0A8I3P521
      Related
      ENSCAFP00845028378.1, ENSCAFT00845036262.1
      Conserved Domains (2) summary
      cd09232
      Location:98 → 282
      Snurportin-1_C; C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1
      pfam11538
      Location:25 → 64
      Snurportin1

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049290.1 Alternate UMICH_Zoey_3.1

      Range
      38558080..38581589 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038517433.1 → XP_038373361.1  snurportin-1

    2. XM_038517431.1 → XP_038373359.1  snurportin-1

    3. XM_038517434.1 → XP_038373362.1  snurportin-1

    4. XM_038517432.1 → XP_038373360.1  snurportin-1

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049771.1 Alternate UNSW_CanFamBas_1.0

      Range
      38602795..38626664 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038645411.1 → XP_038501339.1  snurportin-1

      Conserved Domains (2) summary
      cd09232
      Location:98 → 282
      Snurportin-1_C; C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1
      pfam11538
      Location:25 → 64
      Snurportin1

    2. XM_038645409.1 → XP_038501337.1  snurportin-1

      Conserved Domains (2) summary
      cd09232
      Location:98 → 282
      Snurportin-1_C; C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1
      pfam11538
      Location:25 → 64
      Snurportin1

    3. XM_038645412.1 → XP_038501340.1  snurportin-1

      Conserved Domains (2) summary
      cd09232
      Location:98 → 282
      Snurportin-1_C; C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1
      pfam11538
      Location:25 → 64
      Snurportin1

    4. XM_038645410.1 → XP_038501338.1  snurportin-1

      Conserved Domains (2) summary
      cd09232
      Location:98 → 282
      Snurportin-1_C; C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1
      pfam11538
      Location:25 → 64
      Snurportin1

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049251.1 Alternate UU_Cfam_GSD_1.0

      Range
      38840276..38863881 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038581040.1 → XP_038436968.1  snurportin-1

      UniProtKB/TrEMBL
      A0A8C0MLF2, A0A8C0TCK9, A0A8I3P521
      Conserved Domains (2) summary
      cd09232
      Location:98 → 282
      Snurportin-1_C; C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1
      pfam11538
      Location:25 → 64
      Snurportin1

    2. XM_038581038.1 → XP_038436966.1  snurportin-1

      UniProtKB/TrEMBL
      A0A8C0MLF2, A0A8C0TCK9, A0A8I3P521
      Conserved Domains (2) summary
      cd09232
      Location:98 → 282
      Snurportin-1_C; C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1
      pfam11538
      Location:25 → 64
      Snurportin1

    3. XM_038581041.1 → XP_038436969.1  snurportin-1

      UniProtKB/TrEMBL
      A0A8C0MLF2, A0A8C0TCK9, A0A8I3P521
      Conserved Domains (2) summary
      cd09232
      Location:98 → 282
      Snurportin-1_C; C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1
      pfam11538
      Location:25 → 64
      Snurportin1

    4. XM_038581039.1 → XP_038436967.1  snurportin-1

      UniProtKB/TrEMBL
      A0A8C0MLF2, A0A8C0TCK9, A0A8I3P521
      Conserved Domains (2) summary
      cd09232
      Location:98 → 282
      Snurportin-1_C; C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1
      pfam11538
      Location:25 → 64
      Snurportin1

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006612.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      38331424..38354995 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038461487.1 → XP_038317415.1  snurportin-1

      UniProtKB/TrEMBL
      A0A8C0MLF2, A0A8C0TCK9, A0A8I3P521
      Conserved Domains (2) summary
      cd09232
      Location:98 → 282
      Snurportin-1_C; C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1
      pfam11538
      Location:25 → 64
      Snurportin1

    2. XM_038461485.1 → XP_038317413.1  snurportin-1

      UniProtKB/TrEMBL
      A0A8C0MLF2, A0A8C0TCK9, A0A8I3P521
      Conserved Domains (2) summary
      cd09232
      Location:98 → 282
      Snurportin-1_C; C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1
      pfam11538
      Location:25 → 64
      Snurportin1

    3. XM_038461488.1 → XP_038317416.1  snurportin-1

      UniProtKB/TrEMBL
      A0A8C0MLF2, A0A8C0TCK9, A0A8I3P521
      Conserved Domains (2) summary
      cd09232
      Location:98 → 282
      Snurportin-1_C; C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1
      pfam11538
      Location:25 → 64
      Snurportin1

    4. XM_038461486.1 → XP_038317414.1  snurportin-1

      UniProtKB/TrEMBL
      A0A8C0MLF2, A0A8C0TCK9, A0A8I3P521
      Conserved Domains (2) summary
      cd09232
      Location:98 → 282
      Snurportin-1_C; C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1
      pfam11538
      Location:25 → 64
      Snurportin1
    Nucleotide Protein
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