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    ZBTB8B zinc finger and BTB domain containing 8B [ Canis lupus familiaris (dog) ]

    Gene ID: 487306, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZBTB8Bprovided by VGNC
    Official Full Name
    zinc finger and BTB domain containing 8Bprovided by VGNC
    Primary source
    VGNC:VGNC:110107
    See related
    Ensembl:ENSCAFG00845005792
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See ZBTB8B in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 2 NC_051806.1 (69374578..69398456, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 2 NC_006584.4 (65388890..65412746, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 2 NC_049223.1 (68205954..68229496, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 2 NC_049262.1 (66183529..66235434, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 2 NC_049743.1 (67206880..67230408, complement)

    Chromosome 2 - NC_051806.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 8A Neighboring gene probable UDP-sugar transporter protein SLC35A4 Neighboring gene proliferating cell nuclear antigen-like Neighboring gene uncharacterized LOC111093050 Neighboring gene BSD domain containing 1 Neighboring gene family with sequence similarity 229 member A Neighboring gene testis specific serine kinase 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger and BTB domain-containing protein 8B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051806.1 Reference ROS_Cfam_1.0

      Range
      69374578..69398456 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038659530.1 → XP_038515458.1  zinc finger and BTB domain-containing protein 8B isoform X1

      UniProtKB/TrEMBL
      A0A8C0NJE0, A0A8I3MWU1
      Related
      ENSCAFP00845007995.1, ENSCAFT00845010265.1
      Conserved Domains (4) summary
      sd00017
      Location:378 → 398
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18330
      Location:41 → 153
      BTB_POZ_ZBTB8B; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 8B (ZBTB8B)
      pfam13465
      Location:391 → 415
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:376 → 400
      zf-H2C2_5; C2H2-type zinc-finger domain

    2. XM_038659531.1 → XP_038515459.1  zinc finger and BTB domain-containing protein 8B isoform X3

      UniProtKB/TrEMBL
      A0A8C0NP89, A0A8C0R7P4, A0A8I3MUJ5
      Related
      ENSCAFP00845007982.1, ENSCAFT00845010248.1
      Conserved Domains (4) summary
      sd00017
      Location:343 → 363
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18330
      Location:6 → 118
      BTB_POZ_ZBTB8B; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 8B (ZBTB8B)
      pfam13465
      Location:356 → 380
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:341 → 365
      zf-H2C2_5; C2H2-type zinc-finger domain

    3. XM_038659532.1 → XP_038515460.1  zinc finger and BTB domain-containing protein 8B isoform X2

      Conserved Domains (4) summary
      sd00017
      Location:378 → 398
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18330
      Location:41 → 153
      BTB_POZ_ZBTB8B; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 8B (ZBTB8B)
      pfam13465
      Location:391 → 415
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:376 → 400
      zf-H2C2_5; C2H2-type zinc-finger domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049262.1 Alternate UMICH_Zoey_3.1

      Range
      66183529..66235434 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038470386.1 → XP_038326314.1  zinc finger and BTB domain-containing protein 8B isoform X3

      Conserved Domains (4) summary
      sd00017
      Location:343 → 363
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18330
      Location:6 → 118
      BTB_POZ_ZBTB8B; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 8B (ZBTB8B)
      pfam13465
      Location:356 → 380
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:341 → 365
      zf-H2C2_5; C2H2-type zinc-finger domain

    2. XM_038470385.1 → XP_038326313.1  zinc finger and BTB domain-containing protein 8B isoform X3

      Conserved Domains (4) summary
      sd00017
      Location:343 → 363
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18330
      Location:6 → 118
      BTB_POZ_ZBTB8B; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 8B (ZBTB8B)
      pfam13465
      Location:356 → 380
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:341 → 365
      zf-H2C2_5; C2H2-type zinc-finger domain

    3. XM_038470387.1 → XP_038326315.1  zinc finger and BTB domain-containing protein 8B isoform X4

    RNA

    1. XR_005322283.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049743.1 Alternate UNSW_CanFamBas_1.0

      Range
      67206880..67230408 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038595449.1 → XP_038451377.1  zinc finger and BTB domain-containing protein 8B isoform X3

      Conserved Domains (4) summary
      sd00017
      Location:343 → 363
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18330
      Location:6 → 118
      BTB_POZ_ZBTB8B; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 8B (ZBTB8B)
      pfam13465
      Location:356 → 380
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:341 → 365
      zf-H2C2_5; C2H2-type zinc-finger domain

    2. XM_038595448.1 → XP_038451376.1  zinc finger and BTB domain-containing protein 8B isoform X3

      Conserved Domains (4) summary
      sd00017
      Location:343 → 363
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18330
      Location:6 → 118
      BTB_POZ_ZBTB8B; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 8B (ZBTB8B)
      pfam13465
      Location:356 → 380
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:341 → 365
      zf-H2C2_5; C2H2-type zinc-finger domain

    3. XM_038595450.1 → XP_038451378.1  zinc finger and BTB domain-containing protein 8B isoform X5

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049223.1 Alternate UU_Cfam_GSD_1.0

      Range
      68205954..68229496 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038531225.1 → XP_038387153.1  zinc finger and BTB domain-containing protein 8B isoform X1

      UniProtKB/TrEMBL
      A0A8C0NJE0, A0A8I3MWU1
      Conserved Domains (4) summary
      sd00017
      Location:378 → 398
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18330
      Location:41 → 153
      BTB_POZ_ZBTB8B; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 8B (ZBTB8B)
      pfam13465
      Location:391 → 415
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:376 → 400
      zf-H2C2_5; C2H2-type zinc-finger domain

    2. XM_038531226.1 → XP_038387154.1  zinc finger and BTB domain-containing protein 8B isoform X3

      UniProtKB/TrEMBL
      A0A8C0NP89, A0A8C0R7P4, A0A8I3MUJ5
      Conserved Domains (4) summary
      sd00017
      Location:343 → 363
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18330
      Location:6 → 118
      BTB_POZ_ZBTB8B; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 8B (ZBTB8B)
      pfam13465
      Location:356 → 380
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:341 → 365
      zf-H2C2_5; C2H2-type zinc-finger domain

    3. XM_038531227.1 → XP_038387155.1  zinc finger and BTB domain-containing protein 8B isoform X2

      Conserved Domains (4) summary
      sd00017
      Location:378 → 398
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18330
      Location:41 → 153
      BTB_POZ_ZBTB8B; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 8B (ZBTB8B)
      pfam13465
      Location:391 → 415
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:376 → 400
      zf-H2C2_5; C2H2-type zinc-finger domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006584.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      65388890..65412746 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014109824.3 → XP_013965299.2  zinc finger and BTB domain-containing protein 8B isoform X1

      UniProtKB/TrEMBL
      A0A8C0NJE0, A0A8I3MWU1
      Conserved Domains (4) summary
      sd00017
      Location:378 → 398
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18330
      Location:41 → 153
      BTB_POZ_ZBTB8B; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 8B (ZBTB8B)
      pfam13465
      Location:391 → 415
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:376 → 400
      zf-H2C2_5; C2H2-type zinc-finger domain

    2. XM_022411984.2 → XP_022267692.1  zinc finger and BTB domain-containing protein 8B isoform X3

      UniProtKB/TrEMBL
      A0A8C0NP89, A0A8C0R7P4, A0A8I3MUJ5
      Conserved Domains (4) summary
      sd00017
      Location:343 → 363
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18330
      Location:6 → 118
      BTB_POZ_ZBTB8B; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 8B (ZBTB8B)
      pfam13465
      Location:356 → 380
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:341 → 365
      zf-H2C2_5; C2H2-type zinc-finger domain

    3. XM_022411995.2 → XP_022267703.1  zinc finger and BTB domain-containing protein 8B isoform X2

      Conserved Domains (4) summary
      sd00017
      Location:378 → 398
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18330
      Location:41 → 153
      BTB_POZ_ZBTB8B; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 8B (ZBTB8B)
      pfam13465
      Location:391 → 415
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:376 → 400
      zf-H2C2_5; C2H2-type zinc-finger domain
    Nucleotide Protein
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