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    WNT1 Wnt family member 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 486560, updated on 17-Aug-2024

    Summary

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    Official Symbol
    WNT1provided by VGNC
    Official Full Name
    Wnt family member 1provided by VGNC
    Primary source
    VGNC:VGNC:48419
    See related
    Ensembl:ENSCAFG00845022557
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See WNT1 in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (5639156..5642810, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (40665906..40669560)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (41058211..41061867)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (5603082..5606734, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (5593278..5596931, complement)

    Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene protein kinase AMP-activated non-catalytic subunit gamma 1 Neighboring gene dendrin Neighboring gene Wnt family member 10B Neighboring gene ARF GTPase 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytokine activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables frizzled binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell fate commitment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proto-oncogene Wnt-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051831.1 Reference ROS_Cfam_1.0

      Range
      5639156..5642810 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038437859.1 → XP_038293787.1  proto-oncogene Wnt-1

      UniProtKB/TrEMBL
      A0A8C0P633
      Related
      ENSCAFP00845031197.1, ENSCAFT00845039833.1
      Conserved Domains (1) summary
      cd19333
      Location:34 → 340
      Wnt_Wnt1; Wnt domain found in proto-oncogene Wnt-1 and similar proteins

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049287.1 Alternate UMICH_Zoey_3.1

      Range
      5603082..5606734 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038514279.1 → XP_038370207.1  proto-oncogene Wnt-1

      Conserved Domains (1) summary
      cd19333
      Location:34 → 340
      Wnt_Wnt1; Wnt domain found in proto-oncogene Wnt-1 and similar proteins

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

      Range
      5593278..5596931 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038640328.1 → XP_038496256.1  proto-oncogene Wnt-1

      Conserved Domains (1) summary
      cd19333
      Location:34 → 340
      Wnt_Wnt1; Wnt domain found in proto-oncogene Wnt-1 and similar proteins

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

      Range
      41058211..41061867
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038576164.1 → XP_038432092.1  proto-oncogene Wnt-1

      UniProtKB/TrEMBL
      A0A8C0P633
      Conserved Domains (1) summary
      cd19333
      Location:34 → 340
      Wnt_Wnt1; Wnt domain found in proto-oncogene Wnt-1 and similar proteins

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      40665906..40669560
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_543686.7 → XP_543686.4  proto-oncogene Wnt-1

      UniProtKB/TrEMBL
      A0A8C0P633
      Conserved Domains (1) summary
      cd19333
      Location:34 → 340
      Wnt_Wnt1; Wnt domain found in proto-oncogene Wnt-1 and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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