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    GDPD5 glycerophosphodiester phosphodiesterase domain containing 5 [ Canis lupus familiaris (dog) ]

    Gene ID: 485188, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GDPD5provided by VGNC
    Official Full Name
    glycerophosphodiester phosphodiesterase domain containing 5provided by VGNC
    Primary source
    VGNC:VGNC:41170
    See related
    Ensembl:ENSCAFG00845011562
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See GDPD5 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 21 NC_051825.1 (23274317..23359998)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 21 NC_006603.4 (22837094..22922751)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 21 NC_049242.1 (23186853..23272545)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 21 NC_049281.1 (23072727..23158360)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 21 NC_049762.1 (23269021..23354636)

    Chromosome 21 - NC_051825.1Genomic Context describing neighboring genes Neighboring gene serpin family H member 1 Neighboring gene uncharacterized LOC111091527 Neighboring gene kelch like family member 35 Neighboring gene small nucleolar RNA SNORD15 Neighboring gene ribosomal protein S3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycerophosphodiester phosphodiesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of neuron differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycerophosphodiester phosphodiesterase domain-containing protein 5
    XP_005633546.1
    XP_005633547.1
    XP_022263385.1
    XP_022263388.1
    XP_038285993.1
    XP_038285994.1
    XP_038285995.1
    XP_038285996.1
    XP_038285997.1
    XP_038285998.1
    XP_038312329.1
    XP_038312330.1
    XP_038361367.1
    XP_038361368.1
    XP_038361369.1
    XP_038361371.1
    XP_038361372.1
    XP_038361373.1
    XP_038424529.1
    XP_038424530.1
    XP_038424531.1
    XP_038424532.1
    XP_038424533.1
    XP_038424534.1
    XP_038488699.1
    XP_038488700.1
    XP_038488701.1
    XP_038488702.1
    XP_038488703.1
    XP_038488704.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051825.1 Reference ROS_Cfam_1.0

      Range
      23274317..23359998
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038430066.1 → XP_038285994.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X2

      UniProtKB/TrEMBL
      A0A8C0NNX5, A0A8C0SWP2
      Related
      ENSCAFP00845016284.1, ENSCAFT00845020758.1
      Conserved Domains (1) summary
      cl14615
      Location:240 → 594
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    2. XM_038430067.1 → XP_038285995.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A8C0NR65, A0A8I3NJA3
      Related
      ENSCAFP00845016154.1, ENSCAFT00845020595.1
      Conserved Domains (1) summary
      cl14615
      Location:227 → 581
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    3. XM_038430069.1 → XP_038285997.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X4

      UniProtKB/TrEMBL
      A0A8C0NUU6, A0A8I3NJA3, A0A8P0PBU4
      Related
      ENSCAFP00845016215.1, ENSCAFT00845020676.1
      Conserved Domains (1) summary
      cl14615
      Location:227 → 576
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    4. XM_038430068.1 → XP_038285996.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A8C0NR65, A0A8I3NJA3
      Conserved Domains (1) summary
      cl14615
      Location:227 → 581
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    5. XM_038430070.1 → XP_038285998.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X5

      UniProtKB/TrEMBL
      A0A8C0JLB3
      Conserved Domains (1) summary
      cl14615
      Location:148 → 502
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    6. XM_038430065.1 → XP_038285993.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      A0A8C0SWP2
      Related
      ENSCAFP00845016357.1, ENSCAFT00845020835.1
      Conserved Domains (1) summary
      cl14615
      Location:261 → 615
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049281.1 Alternate UMICH_Zoey_3.1

      Range
      23072727..23158360
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038505440.1 → XP_038361368.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X2

      Conserved Domains (1) summary
      cl14615
      Location:240 → 594
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    2. XM_038505441.1 → XP_038361369.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X3

      Conserved Domains (1) summary
      cl14615
      Location:227 → 581
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    3. XM_038505444.1 → XP_038361372.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X4

      Conserved Domains (1) summary
      cl14615
      Location:227 → 576
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    4. XM_038505443.1 → XP_038361371.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X3

      Conserved Domains (1) summary
      cl14615
      Location:227 → 581
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    5. XM_038505445.1 → XP_038361373.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X5

      Conserved Domains (1) summary
      cl14615
      Location:148 → 502
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    6. XM_038505439.1 → XP_038361367.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

      Conserved Domains (1) summary
      cl14615
      Location:261 → 615
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049762.1 Alternate UNSW_CanFamBas_1.0

      Range
      23269021..23354636
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038632772.1 → XP_038488700.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X2

      Conserved Domains (1) summary
      cl14615
      Location:240 → 594
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    2. XM_038632773.1 → XP_038488701.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X3

      Conserved Domains (1) summary
      cl14615
      Location:227 → 581
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    3. XM_038632775.1 → XP_038488703.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X4

      Conserved Domains (1) summary
      cl14615
      Location:227 → 576
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    4. XM_038632774.1 → XP_038488702.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X3

      Conserved Domains (1) summary
      cl14615
      Location:227 → 581
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    5. XM_038632776.1 → XP_038488704.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X5

      Conserved Domains (1) summary
      cl14615
      Location:148 → 502
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    6. XM_038632771.1 → XP_038488699.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

      Conserved Domains (1) summary
      cl14615
      Location:261 → 615
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049242.1 Alternate UU_Cfam_GSD_1.0

      Range
      23186853..23272545
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038568602.1 → XP_038424530.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X2

      UniProtKB/TrEMBL
      A0A8C0SWP2

    2. XM_038568603.1 → XP_038424531.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A8I3NJA3

    3. XM_038568605.1 → XP_038424533.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X4

      UniProtKB/TrEMBL
      A0A8I3NJA3

    4. XM_038568604.1 → XP_038424532.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A8I3NJA3

    5. XM_038568606.1 → XP_038424534.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X5

      UniProtKB/TrEMBL
      A0A8C0JLB3

    6. XM_038568601.1 → XP_038424529.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      A0A8C0SWP2

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006603.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      22837094..22922751
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022407677.2 → XP_022263385.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X2

      UniProtKB/TrEMBL
      A0A8C0NNX5, A0A8C0SWP2
      Conserved Domains (1) summary
      cl14615
      Location:240 → 594
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    2. XM_005633489.4 → XP_005633546.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A8C0NR65, A0A8I3NJA3
      Conserved Domains (1) summary
      cl14615
      Location:227 → 581
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    3. XM_005633490.4 → XP_005633547.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X4

      UniProtKB/TrEMBL
      A0A8C0NUU6, A0A8I3NJA3, A0A8P0PBU4
      Conserved Domains (1) summary
      cl14615
      Location:227 → 576
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    4. XM_038456402.1 → XP_038312330.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A8C0NR65, A0A8I3NJA3
      Conserved Domains (1) summary
      cl14615
      Location:227 → 581
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    5. XM_022407680.2 → XP_022263388.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X5

      UniProtKB/TrEMBL
      A0A8C0JLB3
      Conserved Domains (1) summary
      cl14615
      Location:148 → 502
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    6. XM_038456401.1 → XP_038312329.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      A0A8C0SWP2
      Conserved Domains (1) summary
      cl14615
      Location:261 → 615
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
    Nucleotide Protein
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