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    ENDOD1 endonuclease domain containing 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 485119, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ENDOD1provided by VGNC
    Official Full Name
    endonuclease domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:52258
    See related
    Ensembl:ENSCAFG00845019180
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See ENDOD1 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 21 NC_051825.1 (6116800..6144191, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 21 NC_006603.4 (5947280..5974692, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 21 NC_049242.1 (6015261..6042671, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 21 NC_049281.1 (5904557..5931927, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 21 NC_049762.1 (5967464..5994845, complement)

    Chromosome 21 - NC_051825.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111091481 Neighboring gene sestrin 3 Neighboring gene uncharacterized LOC111091480 Neighboring gene lysine-specific demethylase 4D-like Neighboring gene lysine-specific demethylase 4D Neighboring gene CWC15 spliceosome associated protein homolog Neighboring gene uncharacterized LOC106560210

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    endonuclease domain-containing 1 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051825.1 Reference ROS_Cfam_1.0

      Range
      6116800..6144191 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038429731.1 → XP_038285659.1  endonuclease domain-containing 1 protein

      UniProtKB/TrEMBL
      A0A8C0NW49, A0A8C0R259, A0A8I3P5J8
      Related
      ENSCAFP00845026479.1, ENSCAFT00845033839.1
      Conserved Domains (1) summary
      cl00089
      Location:63 → 282
      NUC; DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases. They exists as monomers and homodimers.

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049281.1 Alternate UMICH_Zoey_3.1

      Range
      5904557..5931927 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038505150.1 → XP_038361078.1  endonuclease domain-containing 1 protein

      Conserved Domains (1) summary
      cl00089
      Location:63 → 282
      NUC; DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases. They exists as monomers and homodimers.

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049762.1 Alternate UNSW_CanFamBas_1.0

      Range
      5967464..5994845 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038632412.1 → XP_038488340.1  endonuclease domain-containing 1 protein

      Conserved Domains (1) summary
      cl00089
      Location:63 → 282
      NUC; DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases. They exists as monomers and homodimers.

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049242.1 Alternate UU_Cfam_GSD_1.0

      Range
      6015261..6042671 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038568270.1 → XP_038424198.1  endonuclease domain-containing 1 protein

      UniProtKB/TrEMBL
      A0A8C0R259, A0A8P0N6X4
      Conserved Domains (1) summary
      cl00089
      Location:63 → 282
      NUC; DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases. They exists as monomers and homodimers.

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006603.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      5947280..5974692 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005633343.3 → XP_005633400.3  endonuclease domain-containing 1 protein

      UniProtKB/TrEMBL
      A0A8C0R259, A0A8P0N6X4
      Conserved Domains (1) summary
      cl00089
      Location:63 → 282
      NUC; DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases. They exists as monomers and homodimers.
    Nucleotide Protein
    Heading Accession and Version

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