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    PALM paralemmin [ Canis lupus familiaris (dog) ]

    Gene ID: 485098, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PALMprovided by VGNC
    Official Full Name
    paralemminprovided by VGNC
    Primary source
    VGNC:VGNC:54980
    See related
    Ensembl:ENSCAFG00845014695
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 20
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (58590141..58611532, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (57649827..57670978, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (58327378..58348540, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (57644561..57665710, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (58124083..58145219, complement)

    Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene vegetative cell wall protein gp1-like Neighboring gene mitotic spindle positioning Neighboring gene serine protease 57 Neighboring gene follistatin like 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of adenylate cyclase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of filopodium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell shape IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    paralemmin-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051824.1 Reference ROS_Cfam_1.0

      Range
      58590141..58611532 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038429373.1 → XP_038285301.1  paralemmin-1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KTP5, A0A8C0S8Z9
      Conserved Domains (2) summary
      COG1196
      Location:12 → 101
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam03285
      Location:71 → 377
      Paralemmin

    2. XM_038429374.1 → XP_038285302.1  paralemmin-1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KWU7
      Conserved Domains (2) summary
      COG1196
      Location:24 → 113
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam03285
      Location:83 → 345
      Paralemmin

    3. XM_038429372.1 → XP_038285300.1  paralemmin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0S8Z9
      Related
      ENSCAFP00845020743.1, ENSCAFT00845026309.1
      Conserved Domains (2) summary
      COG1196
      Location:24 → 113
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam03285
      Location:83 → 389
      Paralemmin

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049280.1 Alternate UMICH_Zoey_3.1

      Range
      57644561..57665710 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038504898.1 → XP_038360826.1  paralemmin-1 isoform X2

      Conserved Domains (2) summary
      COG1196
      Location:12 → 101
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam03285
      Location:71 → 377
      Paralemmin

    2. XM_038504899.1 → XP_038360827.1  paralemmin-1 isoform X3

      Conserved Domains (2) summary
      COG1196
      Location:24 → 113
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam03285
      Location:83 → 345
      Paralemmin

    3. XM_038504897.1 → XP_038360825.1  paralemmin-1 isoform X1

      Conserved Domains (2) summary
      COG1196
      Location:24 → 113
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam03285
      Location:83 → 389
      Paralemmin

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

      Range
      58124083..58145219 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038632165.1 → XP_038488093.1  paralemmin-1 isoform X2

    2. XM_038632166.1 → XP_038488094.1  paralemmin-1 isoform X3

    3. XM_038632164.1 → XP_038488092.1  paralemmin-1 isoform X1

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

      Range
      58327378..58348540 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038568056.1 → XP_038423984.1  paralemmin-1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KTP5, A0A8C0S8Z9
      Conserved Domains (2) summary
      COG1196
      Location:12 → 101
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam03285
      Location:71 → 377
      Paralemmin

    2. XM_038568057.1 → XP_038423985.1  paralemmin-1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KWU7
      Conserved Domains (2) summary
      COG1196
      Location:24 → 113
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam03285
      Location:83 → 345
      Paralemmin

    3. XM_038568055.1 → XP_038423983.1  paralemmin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0S8Z9
      Conserved Domains (2) summary
      COG1196
      Location:24 → 113
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam03285
      Location:83 → 389
      Paralemmin

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      57649827..57670978 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_542216.6 → XP_542216.4  paralemmin-1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KTP5, A0A8C0S8Z9
      Conserved Domains (2) summary
      COG1196
      Location:12 → 101
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam03285
      Location:71 → 377
      Paralemmin

    2. XM_014122256.3 → XP_013977731.1  paralemmin-1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KWU7
      Conserved Domains (2) summary
      COG1196
      Location:24 → 113
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam03285
      Location:83 → 345
      Paralemmin

    3. XM_014122255.3 → XP_013977730.1  paralemmin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0S8Z9
      Conserved Domains (2) summary
      COG1196
      Location:24 → 113
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam03285
      Location:83 → 389
      Paralemmin
    Nucleotide Protein
    Heading Accession and Version

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