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    CD8B CD8 subunit beta [ Canis lupus familiaris (dog) ]

    Gene ID: 483076, updated on 5-Mar-2024

    Summary

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    Gene symbol
    CD8B
    Gene description
    CD8 subunit beta
    See related
    Ensembl:ENSCAFG00845013126
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See CD8B in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (39074878..39090088)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (38027714..38042969)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (38626364..38641576)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (38242011..38257216)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (38277858..38293076)

    Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L26-like 1 Neighboring gene lysine rich coiled-coil 1 Neighboring gene zinc finger matrin-type protein 1-like Neighboring gene uncharacterized LOC111090626 Neighboring gene CD8 subunit alpha Neighboring gene required for meiotic nuclear division 5 homolog A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables MHC class I protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables coreceptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    T-cell surface glycoprotein CD8 beta chain; LOW QUALITY PROTEIN: T-cell surface glycoprotein CD8 beta chain
    Names
    CD8b molecule

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051821.1 Reference ROS_Cfam_1.0

      Range
      39074878..39090088
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038691486.1 → XP_038547414.1  T-cell surface glycoprotein CD8 beta chain

      UniProtKB/TrEMBL
      A0A8C0MFP2, A0A8C0MNN1, A0A8I3NRH8
      Related
      ENSCAFP00845018341.1, ENSCAFT00845023369.1
      Conserved Domains (1) summary
      cd07700
      Location:22 → 135
      IgV_CD8_beta; Immunoglobulin (Ig) variable (V) domain of Cluster of Differentiation (CD) 8 beta chain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049277.1 Alternate UMICH_Zoey_3.1

      Range
      38242011..38257216
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038498936.1 → XP_038354864.1  T-cell surface glycoprotein CD8 beta chain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

      Range
      38277858..38293076
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038625565.1 → XP_038481493.1  T-cell surface glycoprotein CD8 beta chain

      Conserved Domains (1) summary
      cd07700
      Location:22 → 135
      IgV_CD8_beta; Immunoglobulin (Ig) variable (V) domain of Cluster of Differentiation (CD) 8 beta chain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

      Range
      38626364..38641576
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038561522.1 → XP_038417450.1  LOW QUALITY PROTEIN: T-cell surface glycoprotein CD8 beta chain

      UniProtKB/TrEMBL
      A0A8C0MFP2, A0A8C0MNN1, A0A8I3NRH8
      Conserved Domains (1) summary
      cd07700
      Location:22 → 135
      IgV_CD8_beta; Immunoglobulin (Ig) variable (V) domain of Cluster of Differentiation (CD) 8 beta chain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      38027714..38042969
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_859954.5 → XP_865047.1  T-cell surface glycoprotein CD8 beta chain

      UniProtKB/TrEMBL
      A0A8C0SQ09, A0A8C0SR70, A0A8P0NZK4, A0A8P0SCN4
      Conserved Domains (2) summary
      smart00410
      Location:26 → 134
      IG_like; Immunoglobulin like
      cl11960
      Location:29 → 134
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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