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    SLC6A9 solute carrier family 6 member 9 [ Canis lupus familiaris (dog) ]

    Gene ID: 482526, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC6A9provided by VGNC
    Official Full Name
    solute carrier family 6 member 9provided by VGNC
    Primary source
    VGNC:VGNC:46469
    See related
    Ensembl:ENSCAFG00845027651
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 15
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 15 NC_051819.1 (16390376..16422650)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 15 NC_006597.4 (16356708..16389086)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 15 NC_049236.1 (16330949..16363315)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 15 NC_049275.1 (16189225..16221582)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 15 NC_049756.1 (16257816..16290585)

    Chromosome 15 - NC_051819.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111098989 Neighboring gene uncharacterized LOC119869369 Neighboring gene uncharacterized LOC111098990 Neighboring gene coiled-coil domain containing 24 Neighboring gene beta-1,4-galactosyltransferase 2 Neighboring gene ATPase H+ transporting V0 subunit b

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycine:sodium symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glycine import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neurotransmitter transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic transmission, glycinergic IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium- and chloride-dependent glycine transporter 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051819.1 Reference ROS_Cfam_1.0

      Range
      16390376..16422650
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038687936.1 → XP_038543864.1  sodium- and chloride-dependent glycine transporter 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KXR0, A0A8C0Q3L9, A0A8I3Q117, A0A8I3SAY9
      Related
      ENSCAFP00845038266.1, ENSCAFT00845048771.1
      Conserved Domains (1) summary
      cd11498
      Location:11 → 594
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    2. XM_038687940.1 → XP_038543868.1  sodium- and chloride-dependent glycine transporter 1 isoform X4

      UniProtKB/TrEMBL
      A0A8I3SAY9
      Conserved Domains (1) summary
      cl00456
      Location:26 → 556
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    3. XM_038687937.1 → XP_038543865.1  sodium- and chloride-dependent glycine transporter 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KXR0, A0A8C0Q3L9, A0A8I3Q117, A0A8I3SAY9
      Conserved Domains (1) summary
      cd11498
      Location:11 → 594
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    4. XM_038687938.1 → XP_038543866.1  sodium- and chloride-dependent glycine transporter 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KXR0, A0A8C0Q3L9, A0A8I3Q117, A0A8I3SAY9
      Conserved Domains (1) summary
      cd11498
      Location:11 → 594
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    5. XM_038687942.1 → XP_038543870.1  sodium- and chloride-dependent glycine transporter 1 isoform X1

      UniProtKB/TrEMBL
      A0A8I3SAY9
      Conserved Domains (1) summary
      cl00456
      Location:1 → 529
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    6. XM_038687935.1 → XP_038543863.1  sodium- and chloride-dependent glycine transporter 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0Q5C1, A0A8C0RYF9, A0A8I3Q2P9
      Related
      ENSCAFP00845038448.1, ENSCAFT00845049007.1
      Conserved Domains (1) summary
      cd11498
      Location:31 → 614
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    7. XM_038687934.1 → XP_038543862.1  sodium- and chloride-dependent glycine transporter 1 isoform X1

      UniProtKB/TrEMBL
      A0A8I3SAY9
      Conserved Domains (1) summary
      cl00456
      Location:1 → 529
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    8. XM_038687941.1 → XP_038543869.1  sodium- and chloride-dependent glycine transporter 1 isoform X4

      UniProtKB/TrEMBL
      A0A8I3SAY9
      Conserved Domains (1) summary
      cl00456
      Location:26 → 556
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    9. XM_038687939.1 → XP_038543867.1  sodium- and chloride-dependent glycine transporter 1 isoform X1

      UniProtKB/TrEMBL
      A0A8I3SAY9
      Conserved Domains (1) summary
      cl00456
      Location:1 → 529
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049275.1 Alternate UMICH_Zoey_3.1

      Range
      16189225..16221582
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038495942.1 → XP_038351870.1  sodium- and chloride-dependent glycine transporter 1 isoform X3

      Conserved Domains (1) summary
      cd11498
      Location:11 → 594
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    2. XM_038495945.1 → XP_038351873.1  sodium- and chloride-dependent glycine transporter 1 isoform X4

      Conserved Domains (1) summary
      cl00456
      Location:26 → 556
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    3. XM_038495943.1 → XP_038351871.1  sodium- and chloride-dependent glycine transporter 1 isoform X3

      Conserved Domains (1) summary
      cd11498
      Location:11 → 594
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    4. XM_038495944.1 → XP_038351872.1  sodium- and chloride-dependent glycine transporter 1 isoform X3

      Conserved Domains (1) summary
      cd11498
      Location:11 → 594
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    5. XM_038495947.1 → XP_038351875.1  sodium- and chloride-dependent glycine transporter 1 isoform X1

      Conserved Domains (1) summary
      cl00456
      Location:1 → 529
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    6. XM_038495941.1 → XP_038351869.1  sodium- and chloride-dependent glycine transporter 1 isoform X2

      Conserved Domains (1) summary
      cd11498
      Location:31 → 614
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    7. XM_038495946.1 → XP_038351874.1  sodium- and chloride-dependent glycine transporter 1 isoform X4

      Conserved Domains (1) summary
      cl00456
      Location:26 → 556
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    8. XM_038495948.1 → XP_038351876.1  sodium- and chloride-dependent glycine transporter 1 isoform X1

      Conserved Domains (1) summary
      cl00456
      Location:1 → 529
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049756.1 Alternate UNSW_CanFamBas_1.0

      Range
      16257816..16290585
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038622208.1 → XP_038478136.1  sodium- and chloride-dependent glycine transporter 1 isoform X3

      Conserved Domains (1) summary
      cd11498
      Location:11 → 594
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    2. XM_038622211.1 → XP_038478139.1  sodium- and chloride-dependent glycine transporter 1 isoform X4

      Conserved Domains (1) summary
      cl00456
      Location:26 → 556
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    3. XM_038622209.1 → XP_038478137.1  sodium- and chloride-dependent glycine transporter 1 isoform X3

      Conserved Domains (1) summary
      cd11498
      Location:11 → 594
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    4. XM_038622210.1 → XP_038478138.1  sodium- and chloride-dependent glycine transporter 1 isoform X3

      Conserved Domains (1) summary
      cd11498
      Location:11 → 594
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    5. XM_038622214.1 → XP_038478142.1  sodium- and chloride-dependent glycine transporter 1 isoform X1

      Conserved Domains (1) summary
      cl00456
      Location:1 → 529
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    6. XM_038622207.1 → XP_038478135.1  sodium- and chloride-dependent glycine transporter 1 isoform X2

      Conserved Domains (1) summary
      cd11498
      Location:31 → 614
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    7. XM_038622206.1 → XP_038478134.1  sodium- and chloride-dependent glycine transporter 1 isoform X1

      Conserved Domains (1) summary
      cl00456
      Location:1 → 529
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    8. XM_038622213.1 → XP_038478141.1  sodium- and chloride-dependent glycine transporter 1 isoform X4

      Conserved Domains (1) summary
      cl00456
      Location:26 → 556
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049236.1 Alternate UU_Cfam_GSD_1.0

      Range
      16330949..16363315
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038558317.1 → XP_038414245.1  sodium- and chloride-dependent glycine transporter 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KXR0, A0A8C0Q3L9, A0A8I3Q117, A0A8I3SAY9
      Conserved Domains (1) summary
      cd11498
      Location:11 → 594
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    2. XM_038558320.1 → XP_038414248.1  sodium- and chloride-dependent glycine transporter 1 isoform X4

      UniProtKB/TrEMBL
      A0A8I3SAY9
      Conserved Domains (1) summary
      cl00456
      Location:26 → 556
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    3. XM_038558318.1 → XP_038414246.1  sodium- and chloride-dependent glycine transporter 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KXR0, A0A8C0Q3L9, A0A8I3Q117, A0A8I3SAY9
      Conserved Domains (1) summary
      cd11498
      Location:11 → 594
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    4. XM_038558319.1 → XP_038414247.1  sodium- and chloride-dependent glycine transporter 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KXR0, A0A8C0Q3L9, A0A8I3Q117, A0A8I3SAY9
      Conserved Domains (1) summary
      cd11498
      Location:11 → 594
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    5. XM_038558323.1 → XP_038414251.1  sodium- and chloride-dependent glycine transporter 1 isoform X1

      UniProtKB/TrEMBL
      A0A8I3SAY9
      Conserved Domains (1) summary
      cl00456
      Location:1 → 529
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    6. XM_038558316.1 → XP_038414244.1  sodium- and chloride-dependent glycine transporter 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0Q5C1, A0A8C0RYF9, A0A8I3Q2P9
      Conserved Domains (1) summary
      cd11498
      Location:31 → 614
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    7. XM_038558324.1 → XP_038414252.1  sodium- and chloride-dependent glycine transporter 1 isoform X5

      Conserved Domains (1) summary
      cl00456
      Location:31 → 500
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    8. XM_038558321.1 → XP_038414249.1  sodium- and chloride-dependent glycine transporter 1 isoform X4

      UniProtKB/TrEMBL
      A0A8I3SAY9
      Conserved Domains (1) summary
      cl00456
      Location:26 → 556
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006597.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      16356708..16389086
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005629097.4 → XP_005629154.1  sodium- and chloride-dependent glycine transporter 1 isoform X3

      See identical proteins and their annotated locations for XP_005629154.1

      UniProtKB/TrEMBL
      A0A8C0KXR0, A0A8C0Q3L9, A0A8I3Q117, A0A8I3SAY9
      Conserved Domains (1) summary
      cd11498
      Location:11 → 594
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    2. XM_022428046.2 → XP_022283754.1  sodium- and chloride-dependent glycine transporter 1 isoform X4

      UniProtKB/TrEMBL
      A0A8I3SAY9
      Conserved Domains (1) summary
      cl00456
      Location:26 → 556
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    3. XM_022428045.2 → XP_022283753.1  sodium- and chloride-dependent glycine transporter 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KXR0, A0A8C0Q3L9, A0A8I3Q117, A0A8I3SAY9
      Conserved Domains (1) summary
      cd11498
      Location:11 → 594
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    4. XM_005629099.4 → XP_005629156.1  sodium- and chloride-dependent glycine transporter 1 isoform X3

      See identical proteins and their annotated locations for XP_005629156.1

      UniProtKB/TrEMBL
      A0A8C0KXR0, A0A8C0Q3L9, A0A8I3Q117, A0A8I3SAY9
      Conserved Domains (1) summary
      cd11498
      Location:11 → 594
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    5. XM_022428044.2 → XP_022283752.1  sodium- and chloride-dependent glycine transporter 1 isoform X1

      UniProtKB/TrEMBL
      A0A8I3SAY9
      Conserved Domains (1) summary
      cl00456
      Location:1 → 529
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    6. XM_857445.6 → XP_862538.2  sodium- and chloride-dependent glycine transporter 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0Q5C1, A0A8C0RYF9, A0A8I3Q2P9
      Conserved Domains (1) summary
      cd11498
      Location:31 → 614
      SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

    7. XM_038451855.1 → XP_038307783.1  sodium- and chloride-dependent glycine transporter 1 isoform X6

      Conserved Domains (1) summary
      cl00456
      Location:31 → 500
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    8. XM_022428047.2 → XP_022283755.1  sodium- and chloride-dependent glycine transporter 1 isoform X4

      UniProtKB/TrEMBL
      A0A8I3SAY9
      Conserved Domains (1) summary
      cl00456
      Location:26 → 556
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
    Nucleotide Protein
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