U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    TRAPPC9 trafficking protein particle complex subunit 9 [ Canis lupus familiaris (dog) ]

    Gene ID: 482058, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TRAPPC9provided by VGNC
    Official Full Name
    trafficking protein particle complex subunit 9provided by VGNC
    Primary source
    VGNC:VGNC:47788
    See related
    Ensembl:ENSCAFG00845011965
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    NIBP
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TRAPPC9 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (34961156..35508264, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (34496817..34982923, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (35193579..35738283, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (34684318..35228787, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (34773879..35318617, complement)

    Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111098571 Neighboring gene uncharacterized LOC119865344 Neighboring gene potassium two pore domain channel subfamily K member 9 Neighboring gene uncharacterized LOC106559658 Neighboring gene tropomyosin alpha-3 chain-like Neighboring gene uncharacterized LOC111098573 Neighboring gene uncharacterized LOC111098574 Neighboring gene chromatin accessibility complex subunit 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    trafficking protein particle complex subunit 9; LOW QUALITY PROTEIN: trafficking protein particle complex subunit 9
    Names
    trafficking protein particle complex 9

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051817.1 Reference ROS_Cfam_1.0

      Range
      34961156..35508264 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038685109.1 → XP_038541037.1  trafficking protein particle complex subunit 9 isoform X4

      UniProtKB/TrEMBL
      A0A8C0KJ44
      Conserved Domains (1) summary
      pfam08626
      Location:14 → 1091
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    2. XM_038685112.1 → XP_038541040.1  trafficking protein particle complex subunit 9 isoform X7

      UniProtKB/TrEMBL
      A0A8C0RQA2, A0A8I3NB69
      Related
      ENSCAFP00845016757.1, ENSCAFT00845021306.1
      Conserved Domains (1) summary
      pfam08626
      Location:14 → 1052
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    3. XM_038685108.1 → XP_038541036.1  trafficking protein particle complex subunit 9 isoform X3

      UniProtKB/TrEMBL
      A0A8C0RQA2
      Related
      ENSCAFP00845016806.1, ENSCAFT00845021373.1
      Conserved Domains (1) summary
      pfam08626
      Location:14 → 1100
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    4. XM_038685115.1 → XP_038541043.1  trafficking protein particle complex subunit 9 isoform X10

      UniProtKB/TrEMBL
      A0A8C0KMX8
      Conserved Domains (1) summary
      pfam08626
      Location:14 → 901
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    5. XM_038685107.1 → XP_038541035.1  trafficking protein particle complex subunit 9 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KMX8
      Conserved Domains (1) summary
      pfam08626
      Location:14 → 892
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    6. XM_038685110.1 → XP_038541038.1  trafficking protein particle complex subunit 9 isoform X5

      UniProtKB/TrEMBL
      A0A8C0KMX8
      Conserved Domains (1) summary
      pfam08626
      Location:14 → 853
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    7. XM_038685106.1 → XP_038541034.1  trafficking protein particle complex subunit 9 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KMX8
      Conserved Domains (1) summary
      pfam08626
      Location:14 → 901
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    8. XM_038685114.1 → XP_038541042.1  trafficking protein particle complex subunit 9 isoform X9

      UniProtKB/TrEMBL
      A0A8C0KMX8
      Conserved Domains (1) summary
      pfam08626
      Location:14 → 901
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    9. XM_038685113.1 → XP_038541041.1  trafficking protein particle complex subunit 9 isoform X8

      UniProtKB/TrEMBL
      A0A8C0KMX8
      Conserved Domains (1) summary
      pfam08626
      Location:14 → 901
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    10. XM_038685111.1 → XP_038541039.1  trafficking protein particle complex subunit 9 isoform X6

      UniProtKB/TrEMBL
      A0A8C0KMX8
      Conserved Domains (1) summary
      pfam08626
      Location:14 → 901
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049273.1 Alternate UMICH_Zoey_3.1

      Range
      34684318..35228787 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038493350.1 → XP_038349278.1  trafficking protein particle complex subunit 9 isoform X4

      Conserved Domains (1) summary
      pfam08626
      Location:14 → 1091
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    2. XM_038493353.1 → XP_038349281.1  trafficking protein particle complex subunit 9 isoform X7

      Conserved Domains (1) summary
      pfam08626
      Location:14 → 1052
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    3. XM_038493349.1 → XP_038349277.1  trafficking protein particle complex subunit 9 isoform X3

      Conserved Domains (1) summary
      pfam08626
      Location:14 → 1100
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    4. XM_038493356.1 → XP_038349284.1  trafficking protein particle complex subunit 9 isoform X10

      Conserved Domains (1) summary
      pfam08626
      Location:14 → 901
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    5. XM_038493348.1 → XP_038349276.1  trafficking protein particle complex subunit 9 isoform X2

    6. XM_038493351.1 → XP_038349279.1  trafficking protein particle complex subunit 9 isoform X5

    7. XM_038493347.1 → XP_038349275.1  trafficking protein particle complex subunit 9 isoform X1

    8. XM_038493355.1 → XP_038349283.1  trafficking protein particle complex subunit 9 isoform X9

      Conserved Domains (1) summary
      pfam08626
      Location:14 → 901
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    9. XM_038493354.1 → XP_038349282.1  trafficking protein particle complex subunit 9 isoform X8

      Conserved Domains (1) summary
      pfam08626
      Location:14 → 901
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    10. XM_038493352.1 → XP_038349280.1  trafficking protein particle complex subunit 9 isoform X6

      Conserved Domains (1) summary
      pfam08626
      Location:14 → 901
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

      Range
      34773879..35318617 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038619502.1 → XP_038475430.1  trafficking protein particle complex subunit 9 isoform X4

    2. XM_038619505.1 → XP_038475433.1  trafficking protein particle complex subunit 9 isoform X7

    3. XM_038619501.1 → XP_038475429.1  trafficking protein particle complex subunit 9 isoform X3

    4. XM_038619508.1 → XP_038475436.1  trafficking protein particle complex subunit 9 isoform X10

      Conserved Domains (1) summary
      pfam08626
      Location:14 → 901
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    5. XM_038619500.1 → XP_038475428.1  trafficking protein particle complex subunit 9 isoform X2

      Conserved Domains (1) summary
      pfam08626
      Location:14 → 892
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    6. XM_038619503.1 → XP_038475431.1  trafficking protein particle complex subunit 9 isoform X5

      Conserved Domains (1) summary
      pfam08626
      Location:14 → 853
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    7. XM_038619499.1 → XP_038475427.1  trafficking protein particle complex subunit 9 isoform X1

      Conserved Domains (1) summary
      pfam08626
      Location:14 → 901
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    8. XM_038619507.1 → XP_038475435.1  trafficking protein particle complex subunit 9 isoform X9

      Conserved Domains (1) summary
      pfam08626
      Location:14 → 901
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    9. XM_038619506.1 → XP_038475434.1  trafficking protein particle complex subunit 9 isoform X8

      Conserved Domains (1) summary
      pfam08626
      Location:14 → 901
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    10. XM_038619504.1 → XP_038475432.1  trafficking protein particle complex subunit 9 isoform X6

      Conserved Domains (1) summary
      pfam08626
      Location:14 → 901
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

      Range
      35193579..35738283 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038555604.1 → XP_038411532.1  LOW QUALITY PROTEIN: trafficking protein particle complex subunit 9 isoform X3

      UniProtKB/TrEMBL
      A0A8C0RQA2
      Conserved Domains (1) summary
      pfam08626
      Location:14 → 1100
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      34496817..34982923 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038688816.1 → XP_038544744.1  trafficking protein particle complex subunit 9 isoform X11

      UniProtKB/TrEMBL
      A0A8P0S7B0
      Conserved Domains (1) summary
      pfam08626
      Location:14 → 499
      TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials