U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    ELFN2 extracellular leucine rich repeat and fibronectin type III domain containing 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 481269, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    ELFN2
    Gene description
    extracellular leucine rich repeat and fibronectin type III domain containing 2
    See related
    Ensembl:ENSCAFG00845007179
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    LRRC62
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ELFN2 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (27927688..27984620)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (27090346..27147272)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (28135922..28192870)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (27649483..27706433)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (27958169..28015057)

    Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase Neighboring gene uncharacterized LOC119873760 Neighboring gene uncharacterized LOC119873633 Neighboring gene microRNA mir-8828 Neighboring gene uncharacterized LOC102156668 Neighboring gene cytohesin 4

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein phosphatase 1 regulatory subunit 29
    Names
    extracellular leucine-rich repeat and fibronectin type III containing 2
    leucine rich repeat containing 62

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051814.1 Reference ROS_Cfam_1.0

      Range
      27927688..27984620
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038679950.1 → XP_038535878.1  protein phosphatase 1 regulatory subunit 29

      UniProtKB/TrEMBL
      A0A8C0N4H3, A0A8C0QV28, A0A8I3N382
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:177 → 199
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    2. XM_038679949.1 → XP_038535877.1  protein phosphatase 1 regulatory subunit 29

      UniProtKB/TrEMBL
      A0A8C0N4H3, A0A8C0QV28, A0A8I3N382
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:177 → 199
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    3. XM_038679948.1 → XP_038535876.1  protein phosphatase 1 regulatory subunit 29

      UniProtKB/TrEMBL
      A0A8C0N4H3, A0A8C0QV28, A0A8I3N382
      Related
      ENSCAFP00845009913.1, ENSCAFT00845012709.1
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:177 → 199
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    4. XM_038679951.1 → XP_038535879.1  protein phosphatase 1 regulatory subunit 29

      UniProtKB/TrEMBL
      A0A8C0N4H3, A0A8C0QV28, A0A8I3N382
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:177 → 199
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049270.1 Alternate UMICH_Zoey_3.1

      Range
      27649483..27706433
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038488693.1 → XP_038344621.1  protein phosphatase 1 regulatory subunit 29

      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:177 → 199
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    2. XM_038488692.1 → XP_038344620.1  protein phosphatase 1 regulatory subunit 29

      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:177 → 199
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    3. XM_038488695.1 → XP_038344623.1  protein phosphatase 1 regulatory subunit 29

      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:177 → 199
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    4. XM_038488694.1 → XP_038344622.1  protein phosphatase 1 regulatory subunit 29

      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:177 → 199
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

      Range
      27958169..28015057
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038614589.1 → XP_038470517.1  protein phosphatase 1 regulatory subunit 29

    2. XM_038614588.1 → XP_038470516.1  protein phosphatase 1 regulatory subunit 29

    3. XM_038614591.1 → XP_038470519.1  protein phosphatase 1 regulatory subunit 29

    4. XM_038614590.1 → XP_038470518.1  protein phosphatase 1 regulatory subunit 29

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

      Range
      28135922..28192870
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038550655.1 → XP_038406583.1  protein phosphatase 1 regulatory subunit 29

      UniProtKB/TrEMBL
      A0A8C0N4H3, A0A8C0QV28, A0A8I3N382
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:177 → 199
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    2. XM_038550653.1 → XP_038406581.1  protein phosphatase 1 regulatory subunit 29

      UniProtKB/TrEMBL
      A0A8C0N4H3, A0A8C0QV28, A0A8I3N382
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:177 → 199
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    3. XM_038550657.1 → XP_038406585.1  protein phosphatase 1 regulatory subunit 29

      UniProtKB/TrEMBL
      A0A8C0N4H3, A0A8C0QV28, A0A8I3N382
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:177 → 199
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    4. XM_038550656.1 → XP_038406584.1  protein phosphatase 1 regulatory subunit 29

      UniProtKB/TrEMBL
      A0A8C0N4H3, A0A8C0QV28, A0A8I3N382
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:177 → 199
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      27090346..27147272
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038640301.1 → XP_038496229.1  protein phosphatase 1 regulatory subunit 29

      UniProtKB/TrEMBL
      A0A8C0N4H3, A0A8C0QV28, A0A8I3N382
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:177 → 199
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    2. XM_038640300.1 → XP_038496228.1  protein phosphatase 1 regulatory subunit 29

      UniProtKB/TrEMBL
      A0A8C0N4H3, A0A8C0QV28, A0A8I3N382
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:177 → 199
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    3. XM_038640299.1 → XP_038496227.1  protein phosphatase 1 regulatory subunit 29

      UniProtKB/TrEMBL
      A0A8C0N4H3, A0A8C0QV28, A0A8I3N382
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:177 → 199
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    4. XM_038640302.1 → XP_038496230.1  protein phosphatase 1 regulatory subunit 29

      UniProtKB/TrEMBL
      A0A8C0N4H3, A0A8C0QV28, A0A8I3N382
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:177 → 199
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.