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    FMR1 Fragile X messenger ribonucleoprotein 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 481070, updated on 17-Aug-2024

    Summary

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    Official Symbol
    FMR1provided by VGNC
    Official Full Name
    Fragile X messenger ribonucleoprotein 1provided by VGNC
    Primary source
    VGNC:VGNC:40922
    See related
    Ensembl:ENSCAFG00845020694
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See FMR1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) X NC_051843.1 (118308237..118346144)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) X NC_006621.4 (102141952..102179858)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) X NC_049260.1 (117359050..117396958)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) X NC_049299.1 (115421122..115459027)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) X NC_049780.1 (117632687..117670590)

    Chromosome X - NC_051843.1Genomic Context describing neighboring genes Neighboring gene probable G-protein coupled receptor 173 Neighboring gene uncharacterized LOC119868530 Neighboring gene 60S ribosomal protein L31-like Neighboring gene FMR1 neighbor Neighboring gene small nucleolar RNA SNORA70

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Interaction of the transcription factors USF1, USF2, and alpha -Pal/Nrf-1 with the FMR1 promoter. Implications for Fragile X mental retardation syndrome. Kumari D, et al. J Biol Chem, 2001 Feb 9. PMID 11058604
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA 3'-UTR binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein homodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA damage response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in anterograde axonal transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in central nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of alternative mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of dendrite morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of dendritic spine development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of filopodium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of mRNA stability IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of modification of synaptic structure IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of translation at postsynapse, modulating synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in dendritic filopodium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in dendritic spine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in dendritic spine neck IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in growth cone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuronal cell body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuronal ribonucleoprotein granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic density IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in presynapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptic functional regulator FMR1
    Names
    FMRP translational regulator 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051843.1 Reference ROS_Cfam_1.0

      Range
      118308237..118346144
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038451040.1 → XP_038306968.1  synaptic functional regulator FMR1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YYH6, A0A8I3PAW4, A0A8P0TBR6
      Related
      ENSCAFP00845028666.1, ENSCAFT00845036626.1
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 524
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:550 → 632
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    2. XM_038451042.1 → XP_038306970.1  synaptic functional regulator FMR1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0NQG5, A0A8C0YYH6
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 524
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:550 → 615
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    3. XM_038451041.1 → XP_038306969.1  synaptic functional regulator FMR1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0YYH6
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 512
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:538 → 620
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    4. XM_038451045.1 → XP_038306973.1  synaptic functional regulator FMR1 isoform X6

      UniProtKB/TrEMBL
      A0A8C0YYH6
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 512
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:538 → 603
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    5. XM_038451044.1 → XP_038306972.1  synaptic functional regulator FMR1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0YYH6
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 490
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:525 → 607
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    6. XM_038451046.1 → XP_038306974.1  synaptic functional regulator FMR1 isoform X7

      UniProtKB/TrEMBL
      A0A8C0YYH6
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 490
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:525 → 590
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    7. XM_038451051.1 → XP_038306979.1  synaptic functional regulator FMR1 isoform X12

      UniProtKB/TrEMBL
      A0A8C0NHZ4, A0A8I3PDV4
      Related
      ENSCAFP00845028896.1, ENSCAFT00845036906.1
      Conserved Domains (5) summary
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    8. XM_038451053.1 → XP_038306981.1  synaptic functional regulator FMR1 isoform X14

      Conserved Domains (5) summary
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    9. XM_038451043.1 → XP_038306971.1  synaptic functional regulator FMR1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0NF57, A0A8I3PB79, A0A8P0T0D3
      Related
      ENSCAFP00845028800.1, ENSCAFT00845036784.1
      Conserved Domains (7) summary
      pfam12235
      Location:399 → 503
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:529 → 611
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22512
      Location:281 → 403
      KH_I_FMR1_rpt3; third type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins

    10. XM_038451047.1 → XP_038306975.1  synaptic functional regulator FMR1 isoform X8

      UniProtKB/TrEMBL
      A0A8C0NF57
      Conserved Domains (7) summary
      pfam12235
      Location:399 → 469
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:504 → 586
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22512
      Location:281 → 403
      KH_I_FMR1_rpt3; third type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins

    11. XM_038451054.1 → XP_038306982.1  synaptic functional regulator FMR1 isoform X15

      Conserved Domains (5) summary
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22512
      Location:281 → 403
      KH_I_FMR1_rpt3; third type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins

    12. XM_038451048.1 → XP_038306976.1  synaptic functional regulator FMR1 isoform X9

      UniProtKB/TrEMBL
      A0A8C0LFX1, A0A8C0NG67, A0A8C0R755
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 524
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:550 → 579
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    13. XM_038451052.1 → XP_038306980.1  synaptic functional regulator FMR1 isoform X13

      UniProtKB/TrEMBL
      A0A8C0R755
      Conserved Domains (6) summary
      pfam12235
      Location:420 → 498
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    14. XM_038451049.1 → XP_038306977.1  synaptic functional regulator FMR1 isoform X10

      UniProtKB/TrEMBL
      A0A8C0R755
      Conserved Domains (6) summary
      pfam12235
      Location:420 → 511
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    15. XM_038451050.1 → XP_038306978.1  synaptic functional regulator FMR1 isoform X11

      UniProtKB/TrEMBL
      A0A8C0YYH6
      Conserved Domains (6) summary
      pfam12235
      Location:335 → 439
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:465 → 547
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd22506
      Location:38 → 114
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:133 → 195
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:196 → 339
      KH-I; K homology (KH) RNA-binding domain, type I
      cl02573
      Location:1 → 41
      Tudor_SF; Tudor domain superfamily

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049299.1 Alternate UMICH_Zoey_3.1

      Range
      115421122..115459027
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038524506.1 → XP_038380434.1  synaptic functional regulator FMR1 isoform X1

      Conserved Domains (7) summary
      pfam12235
      Location:420 → 524
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:550 → 632
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    2. XM_038524508.1 → XP_038380436.1  synaptic functional regulator FMR1 isoform X3

      Conserved Domains (7) summary
      pfam12235
      Location:420 → 524
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:550 → 615
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    3. XM_038524507.1 → XP_038380435.1  synaptic functional regulator FMR1 isoform X2

      Conserved Domains (7) summary
      pfam12235
      Location:420 → 512
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:538 → 620
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    4. XM_038524512.1 → XP_038380440.1  synaptic functional regulator FMR1 isoform X6

      Conserved Domains (7) summary
      pfam12235
      Location:420 → 512
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:538 → 603
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    5. XM_038524510.1 → XP_038380438.1  synaptic functional regulator FMR1 isoform X5

      Conserved Domains (7) summary
      pfam12235
      Location:420 → 490
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:525 → 607
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    6. XM_038524513.1 → XP_038380441.1  synaptic functional regulator FMR1 isoform X7

      Conserved Domains (7) summary
      pfam12235
      Location:420 → 490
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:525 → 590
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    7. XM_038524518.1 → XP_038380446.1  synaptic functional regulator FMR1 isoform X12

      Conserved Domains (5) summary
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    8. XM_038524520.1 → XP_038380448.1  synaptic functional regulator FMR1 isoform X14

      Conserved Domains (5) summary
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    9. XM_038524509.1 → XP_038380437.1  synaptic functional regulator FMR1 isoform X4

      Conserved Domains (7) summary
      pfam12235
      Location:399 → 503
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:529 → 611
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22512
      Location:281 → 403
      KH_I_FMR1_rpt3; third type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins

    10. XM_038524514.1 → XP_038380442.1  synaptic functional regulator FMR1 isoform X8

      Conserved Domains (7) summary
      pfam12235
      Location:399 → 469
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:504 → 586
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22512
      Location:281 → 403
      KH_I_FMR1_rpt3; third type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins

    11. XM_038524521.1 → XP_038380449.1  synaptic functional regulator FMR1 isoform X15

      Conserved Domains (5) summary
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22512
      Location:281 → 403
      KH_I_FMR1_rpt3; third type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins

    12. XM_038524515.1 → XP_038380443.1  synaptic functional regulator FMR1 isoform X9

      Conserved Domains (7) summary
      pfam12235
      Location:420 → 524
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:550 → 579
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    13. XM_038524519.1 → XP_038380447.1  synaptic functional regulator FMR1 isoform X13

      Conserved Domains (6) summary
      pfam12235
      Location:420 → 498
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    14. XM_038524516.1 → XP_038380444.1  synaptic functional regulator FMR1 isoform X10

      Conserved Domains (6) summary
      pfam12235
      Location:420 → 511
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    15. XM_038524517.1 → XP_038380445.1  synaptic functional regulator FMR1 isoform X11

      Conserved Domains (6) summary
      pfam12235
      Location:335 → 439
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:465 → 547
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd22506
      Location:38 → 114
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:133 → 195
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:196 → 339
      KH-I; K homology (KH) RNA-binding domain, type I
      cl02573
      Location:1 → 41
      Tudor_SF; Tudor domain superfamily

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049780.1 Alternate UNSW_CanFamBas_1.0

      Range
      117632687..117670590
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038652999.1 → XP_038508927.1  synaptic functional regulator FMR1 isoform X1

      Conserved Domains (7) summary
      pfam12235
      Location:420 → 524
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:550 → 632
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    2. XM_038653001.1 → XP_038508929.1  synaptic functional regulator FMR1 isoform X3

      Conserved Domains (7) summary
      pfam12235
      Location:420 → 524
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:550 → 615
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    3. XM_038653000.1 → XP_038508928.1  synaptic functional regulator FMR1 isoform X2

      Conserved Domains (7) summary
      pfam12235
      Location:420 → 512
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:538 → 620
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    4. XM_038653004.1 → XP_038508932.1  synaptic functional regulator FMR1 isoform X6

      Conserved Domains (7) summary
      pfam12235
      Location:420 → 512
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:538 → 603
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    5. XM_038653003.1 → XP_038508931.1  synaptic functional regulator FMR1 isoform X5

      Conserved Domains (7) summary
      pfam12235
      Location:420 → 490
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:525 → 607
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    6. XM_038653005.1 → XP_038508933.1  synaptic functional regulator FMR1 isoform X7

      Conserved Domains (7) summary
      pfam12235
      Location:420 → 490
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:525 → 590
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    7. XM_038653010.1 → XP_038508938.1  synaptic functional regulator FMR1 isoform X12

      Conserved Domains (5) summary
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    8. XM_038653012.1 → XP_038508940.1  synaptic functional regulator FMR1 isoform X14

      Conserved Domains (5) summary
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    9. XM_038653002.1 → XP_038508930.1  synaptic functional regulator FMR1 isoform X4

      Conserved Domains (7) summary
      pfam12235
      Location:399 → 503
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:529 → 611
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22512
      Location:281 → 403
      KH_I_FMR1_rpt3; third type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins

    10. XM_038653006.1 → XP_038508934.1  synaptic functional regulator FMR1 isoform X8

      Conserved Domains (7) summary
      pfam12235
      Location:399 → 469
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:504 → 586
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22512
      Location:281 → 403
      KH_I_FMR1_rpt3; third type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins

    11. XM_038653013.1 → XP_038508941.1  synaptic functional regulator FMR1 isoform X15

      Conserved Domains (5) summary
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22512
      Location:281 → 403
      KH_I_FMR1_rpt3; third type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins

    12. XM_038653007.1 → XP_038508935.1  synaptic functional regulator FMR1 isoform X9

      Conserved Domains (7) summary
      pfam12235
      Location:420 → 524
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:550 → 579
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    13. XM_038653011.1 → XP_038508939.1  synaptic functional regulator FMR1 isoform X13

      Conserved Domains (6) summary
      pfam12235
      Location:420 → 498
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    14. XM_038653008.1 → XP_038508936.1  synaptic functional regulator FMR1 isoform X10

      Conserved Domains (6) summary
      pfam12235
      Location:420 → 511
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    15. XM_038653009.1 → XP_038508937.1  synaptic functional regulator FMR1 isoform X11

      Conserved Domains (6) summary
      pfam12235
      Location:335 → 439
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:465 → 547
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd22506
      Location:38 → 114
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:133 → 195
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:196 → 339
      KH-I; K homology (KH) RNA-binding domain, type I
      cl02573
      Location:1 → 41
      Tudor_SF; Tudor domain superfamily

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049260.1 Alternate UU_Cfam_GSD_1.0

      Range
      117359050..117396958
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038588473.1 → XP_038444401.1  synaptic functional regulator FMR1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YYH6, A0A8I3PAW4, A0A8P0TBR6
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 524
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:550 → 632
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    2. XM_038588475.1 → XP_038444403.1  synaptic functional regulator FMR1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0NQG5, A0A8C0YYH6
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 524
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:550 → 615
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    3. XM_038588474.1 → XP_038444402.1  synaptic functional regulator FMR1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0YYH6
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 512
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:538 → 620
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    4. XM_038588478.1 → XP_038444406.1  synaptic functional regulator FMR1 isoform X6

      UniProtKB/TrEMBL
      A0A8C0YYH6
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 512
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:538 → 603
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    5. XM_038588477.1 → XP_038444405.1  synaptic functional regulator FMR1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0YYH6
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 490
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:525 → 607
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    6. XM_038588479.1 → XP_038444407.1  synaptic functional regulator FMR1 isoform X7

      UniProtKB/TrEMBL
      A0A8C0YYH6
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 490
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:525 → 590
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    7. XM_038588484.1 → XP_038444412.1  synaptic functional regulator FMR1 isoform X12

      UniProtKB/TrEMBL
      A0A8C0NHZ4, A0A8I3PDV4
      Conserved Domains (5) summary
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    8. XM_038588486.1 → XP_038444414.1  synaptic functional regulator FMR1 isoform X14

      Conserved Domains (5) summary
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    9. XM_038588476.1 → XP_038444404.1  synaptic functional regulator FMR1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0NF57, A0A8I3PB79, A0A8P0T0D3
      Conserved Domains (7) summary
      pfam12235
      Location:399 → 503
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:529 → 611
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22512
      Location:281 → 403
      KH_I_FMR1_rpt3; third type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins

    10. XM_038588480.1 → XP_038444408.1  synaptic functional regulator FMR1 isoform X8

      UniProtKB/TrEMBL
      A0A8C0NF57
      Conserved Domains (7) summary
      pfam12235
      Location:399 → 469
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:504 → 586
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22512
      Location:281 → 403
      KH_I_FMR1_rpt3; third type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins

    11. XM_038588487.1 → XP_038444415.1  synaptic functional regulator FMR1 isoform X15

      Conserved Domains (5) summary
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22512
      Location:281 → 403
      KH_I_FMR1_rpt3; third type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins

    12. XM_038588481.1 → XP_038444409.1  synaptic functional regulator FMR1 isoform X9

      UniProtKB/TrEMBL
      A0A8C0LFX1, A0A8C0NG67, A0A8C0R755
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 524
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:550 → 579
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    13. XM_038588485.1 → XP_038444413.1  synaptic functional regulator FMR1 isoform X13

      UniProtKB/TrEMBL
      A0A8C0R755
      Conserved Domains (6) summary
      pfam12235
      Location:420 → 498
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    14. XM_038588482.1 → XP_038444410.1  synaptic functional regulator FMR1 isoform X10

      UniProtKB/TrEMBL
      A0A8C0R755
      Conserved Domains (6) summary
      pfam12235
      Location:420 → 511
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    15. XM_038588483.1 → XP_038444411.1  synaptic functional regulator FMR1 isoform X11

      UniProtKB/TrEMBL
      A0A8C0YYH6
      Conserved Domains (6) summary
      pfam12235
      Location:335 → 439
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:465 → 547
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd22506
      Location:38 → 114
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:133 → 195
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:196 → 339
      KH-I; K homology (KH) RNA-binding domain, type I
      cl02573
      Location:1 → 41
      Tudor_SF; Tudor domain superfamily

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      102141952..102179858
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_861525.6 → XP_866618.1  synaptic functional regulator FMR1 isoform X1

      See identical proteins and their annotated locations for XP_866618.1

      UniProtKB/TrEMBL
      A0A8C0YYH6, A0A8I3PAW4, A0A8P0TBR6
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 524
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:550 → 632
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    2. XM_005641904.4 → XP_005641961.1  synaptic functional regulator FMR1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0NQG5, A0A8C0YYH6
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 524
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:550 → 615
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    3. XM_005641903.4 → XP_005641960.1  synaptic functional regulator FMR1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0YYH6
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 512
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:538 → 620
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    4. XM_005641906.4 → XP_005641963.1  synaptic functional regulator FMR1 isoform X6

      UniProtKB/TrEMBL
      A0A8C0YYH6
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 512
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:538 → 603
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    5. XM_005641905.4 → XP_005641962.1  synaptic functional regulator FMR1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0YYH6
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 490
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:525 → 607
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    6. XM_005641907.4 → XP_005641964.1  synaptic functional regulator FMR1 isoform X7

      UniProtKB/TrEMBL
      A0A8C0YYH6
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 490
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:525 → 590
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    7. XM_022415589.2 → XP_022271297.1  synaptic functional regulator FMR1 isoform X12

      UniProtKB/TrEMBL
      A0A8C0NHZ4, A0A8I3PDV4
      Conserved Domains (5) summary
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    8. XM_022415590.2 → XP_022271298.1  synaptic functional regulator FMR1 isoform X14

      Conserved Domains (5) summary
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    9. XM_861597.6 → XP_866690.2  synaptic functional regulator FMR1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0NF57, A0A8I3PB79, A0A8P0T0D3
      Conserved Domains (7) summary
      pfam12235
      Location:399 → 503
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:529 → 611
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22512
      Location:281 → 403
      KH_I_FMR1_rpt3; third type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins

    10. XM_861706.6 → XP_866799.1  synaptic functional regulator FMR1 isoform X8

      UniProtKB/TrEMBL
      A0A8C0NF57
      Conserved Domains (7) summary
      pfam12235
      Location:399 → 469
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:504 → 586
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22512
      Location:281 → 403
      KH_I_FMR1_rpt3; third type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins

    11. XM_022415591.2 → XP_022271299.1  synaptic functional regulator FMR1 isoform X15

      Conserved Domains (5) summary
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22512
      Location:281 → 403
      KH_I_FMR1_rpt3; third type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins

    12. XM_005641908.4 → XP_005641965.1  synaptic functional regulator FMR1 isoform X9

      UniProtKB/TrEMBL
      A0A8C0LFX1, A0A8C0NG67, A0A8C0R755
      Conserved Domains (7) summary
      pfam12235
      Location:420 → 524
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:550 → 579
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    13. XM_038464439.1 → XP_038320367.1  synaptic functional regulator FMR1 isoform X13

      UniProtKB/TrEMBL
      A0A8C0R755
      Conserved Domains (6) summary
      pfam12235
      Location:420 → 498
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    14. XM_005641909.4 → XP_005641966.1  synaptic functional regulator FMR1 isoform X10

      UniProtKB/TrEMBL
      A0A8C0R755
      Conserved Domains (6) summary
      pfam12235
      Location:420 → 511
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      cd20471
      Location:1 → 55
      Tudor_Agenet_FMR1_rpt1; first Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd20474
      Location:58 → 120
      Tudor_Agenet_FMR1_rpt2; second Tudor-like Agenet domain found in synaptic functional regulator FMR1 and similar proteins
      cd22506
      Location:123 → 199
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:218 → 280
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:281 → 424
      KH-I; K homology (KH) RNA-binding domain, type I

    15. XM_038464438.1 → XP_038320366.1  synaptic functional regulator FMR1 isoform X11

      UniProtKB/TrEMBL
      A0A8C0YYH6
      Conserved Domains (6) summary
      pfam12235
      Location:335 → 439
      FXMRP1_C_core; Fragile X-related 1 protein core C terminal
      pfam16098
      Location:465 → 547
      FXMR_C2; Fragile X-related mental retardation protein C-terminal region 2
      cd22506
      Location:38 → 114
      KH_I_FMR1_rpt1; first type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cd22509
      Location:133 → 195
      KH_I_FMR1_rpt2; second type I K homology (KH) RNA-binding domain found in fragile X mental retardation protein 1 (FMR1) and similar proteins
      cl00098
      Location:196 → 339
      KH-I; K homology (KH) RNA-binding domain, type I
      cl02573
      Location:1 → 41
      Tudor_SF; Tudor domain superfamily
    Nucleotide Protein
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