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    PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 480656, updated on 5-Mar-2024

    Summary

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    Official Symbol
    PAFAH1B1provided by VGNC
    Official Full Name
    platelet activating factor acetylhydrolase 1b regulatory subunit 1provided by VGNC
    Primary source
    VGNC:VGNC:44239
    See related
    Ensembl:ENSCAFG00845014548
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See PAFAH1B1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (47482963..47566431)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (45800900..45884016)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (46599366..46680302)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (46250595..46333659)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (46544618..46627828)

    Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene methyltransferase 16, RNA N6-adenosine Neighboring gene uncharacterized LOC119873435 Neighboring gene uncharacterized LOC119873338 Neighboring gene clustered mitochondria homolog Neighboring gene coiled-coil domain containing 92B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    platelet-activating factor acetylhydrolase IB subunit beta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051813.1 Reference ROS_Cfam_1.0

      Range
      47482963..47566431
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038677746.1 → XP_038533674.1  platelet-activating factor acetylhydrolase IB subunit beta

      UniProtKB/TrEMBL
      A0A8C0Q2T5, A0A8I3NIJ2, A0A8I3NR26, A0A8P0SYD2
      Related
      ENSCAFP00845020543.1, ENSCAFT00845026052.1
      Conserved Domains (3) summary
      cd00200
      Location:104 → 408
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:111 → 148
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:10 → 34
      LisH

    2. XM_038677747.1 → XP_038533675.1  platelet-activating factor acetylhydrolase IB subunit beta

      UniProtKB/TrEMBL
      A0A8C0Q2T5, A0A8I3NIJ2, A0A8I3NR26, A0A8P0SYD2
      Conserved Domains (3) summary
      cd00200
      Location:104 → 408
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:111 → 148
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:10 → 34
      LisH

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049269.1 Alternate UMICH_Zoey_3.1

      Range
      46250595..46333659
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038486664.1 → XP_038342592.1  platelet-activating factor acetylhydrolase IB subunit beta

      Conserved Domains (3) summary
      cd00200
      Location:104 → 408
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:111 → 148
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:10 → 34
      LisH

    2. XM_038486665.1 → XP_038342593.1  platelet-activating factor acetylhydrolase IB subunit beta

      Conserved Domains (3) summary
      cd00200
      Location:104 → 408
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:111 → 148
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:10 → 34
      LisH

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

      Range
      46544618..46627828
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038612470.1 → XP_038468398.1  platelet-activating factor acetylhydrolase IB subunit beta

      Conserved Domains (3) summary
      cd00200
      Location:104 → 408
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:111 → 148
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:10 → 34
      LisH

    2. XM_038612471.1 → XP_038468399.1  platelet-activating factor acetylhydrolase IB subunit beta

      Conserved Domains (3) summary
      cd00200
      Location:104 → 408
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:111 → 148
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:10 → 34
      LisH

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

      Range
      46599366..46680302
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038548533.1 → XP_038404461.1  platelet-activating factor acetylhydrolase IB subunit beta

      UniProtKB/TrEMBL
      A0A8C0Q2T5, A0A8I3NIJ2, A0A8I3NR26, A0A8P0SYD2
      Conserved Domains (3) summary
      cd00200
      Location:104 → 408
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:111 → 148
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:10 → 34
      LisH

    2. XM_038548534.1 → XP_038404462.1  platelet-activating factor acetylhydrolase IB subunit beta

      UniProtKB/TrEMBL
      A0A8C0Q2T5, A0A8I3NIJ2, A0A8I3NR26, A0A8P0SYD2
      Conserved Domains (3) summary
      cd00200
      Location:104 → 408
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:111 → 148
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:10 → 34
      LisH

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      45800900..45884016
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_849389.5 → XP_854482.1  platelet-activating factor acetylhydrolase IB subunit beta

      See identical proteins and their annotated locations for XP_854482.1

      UniProtKB/TrEMBL
      A0A8C0Q2T5, A0A8I3NIJ2, A0A8I3NR26, A0A8P0SYD2
      Conserved Domains (3) summary
      cd00200
      Location:104 → 408
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:111 → 148
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:10 → 34
      LisH

    2. XM_005624952.4 → XP_005625009.1  platelet-activating factor acetylhydrolase IB subunit beta

      See identical proteins and their annotated locations for XP_005625009.1

      UniProtKB/TrEMBL
      A0A8C0Q2T5, A0A8I3NIJ2, A0A8I3NR26, A0A8P0SYD2
      Conserved Domains (3) summary
      cd00200
      Location:104 → 408
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:111 → 148
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:10 → 34
      LisH
    Nucleotide Protein
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