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    TAGLN3 transgelin 3 [ Canis lupus familiaris (dog) ]

    Gene ID: 478562, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TAGLN3provided by VGNC
    Official Full Name
    transgelin 3provided by VGNC
    Primary source
    VGNC:VGNC:47095
    See related
    Ensembl:ENSCAFG00845028691
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See TAGLN3 in Genome Data Viewer
    Location:
    chromosome: 33
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 33 NC_051837.1 (16876375..16890186)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 33 NC_006615.4 (16740287..16754046)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 33 NC_049254.1 (17277135..17290982)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 33 NC_049293.1 (16686506..16700298)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 33 NC_049774.1 (16732143..16745953)

    Chromosome 33 - NC_051837.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology like domain family B member 2 Neighboring gene uncharacterized LOC111093728 Neighboring gene abhydrolase domain containing 10, depalmitoylase Neighboring gene transmembrane serine protease 7 Neighboring gene chromosome 33 C3orf52 homolog Neighboring gene uncharacterized LOC111093737

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transgelin-3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051837.1 Reference ROS_Cfam_1.0

      Range
      16876375..16890186
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038444906.1 → XP_038300834.1  transgelin-3

      UniProtKB/TrEMBL
      A0A8C0K590, A0A8C0TIB2, A0A8I3PZB6
      Related
      ENSCAFP00845039750.1, ENSCAFT00845050704.1
      Conserved Domains (2) summary
      pfam00402
      Location:174 → 198
      Calponin; Calponin family repeat
      cd21281
      Location:23 → 141
      CH_TAGLN3; calponin homology (CH) domain found in transgelin-3

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049293.1 Alternate UMICH_Zoey_3.1

      Range
      16686506..16700298
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038519207.1 → XP_038375135.1  transgelin-3

      Conserved Domains (2) summary
      pfam00402
      Location:174 → 198
      Calponin; Calponin family repeat
      cd21281
      Location:23 → 141
      CH_TAGLN3; calponin homology (CH) domain found in transgelin-3

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049774.1 Alternate UNSW_CanFamBas_1.0

      Range
      16732143..16745953
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038647193.1 → XP_038503121.1  transgelin-3

      Conserved Domains (2) summary
      pfam00402
      Location:174 → 198
      Calponin; Calponin family repeat
      cd21281
      Location:23 → 141
      CH_TAGLN3; calponin homology (CH) domain found in transgelin-3

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049254.1 Alternate UU_Cfam_GSD_1.0

      Range
      17277135..17290982
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038582798.1 → XP_038438726.1  transgelin-3

      UniProtKB/TrEMBL
      A0A8C0K590, A0A8C0TIB2, A0A8I3PZB6
      Conserved Domains (2) summary
      pfam00402
      Location:174 → 198
      Calponin; Calponin family repeat
      cd21281
      Location:23 → 141
      CH_TAGLN3; calponin homology (CH) domain found in transgelin-3

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006615.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      16740287..16754046
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_535738.8 → XP_535738.1  transgelin-3

      UniProtKB/TrEMBL
      A0A8C0K590, A0A8C0TIB2, A0A8I3PZB6
      Conserved Domains (2) summary
      pfam00402
      Location:174 → 198
      Calponin; Calponin family repeat
      cd21281
      Location:23 → 141
      CH_TAGLN3; calponin homology (CH) domain found in transgelin-3
    Nucleotide Protein
    Heading Accession and Version

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