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    CPN1 carboxypeptidase N subunit 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 477795, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CPN1provided by VGNC
    Official Full Name
    carboxypeptidase N subunit 1provided by VGNC
    Primary source
    VGNC:VGNC:39558
    See related
    Ensembl:ENSCAFG00845016127
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See CPN1 in Genome Data Viewer
    Location:
    chromosome: 28
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 28 NC_051832.1 (13344541..13371085, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 28 NC_006610.4 (13059343..13092971, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 28 NC_049249.1 (13063739..13097391, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 28 NC_049288.1 (12891401..12925017, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 28 NC_049769.1 (12929454..12963113, complement)

    Chromosome 28 - NC_051832.1Genomic Context describing neighboring genes Neighboring gene dynamin binding protein Neighboring gene tropomyosin alpha-3 chain-like Neighboring gene histone deacetylase 2-like Neighboring gene ER lipid raft associated 1 Neighboring gene uncharacterized LOC119866575

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metallocarboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    carboxypeptidase N catalytic chain; LOW QUALITY PROTEIN: carboxypeptidase N catalytic chain
    XP_013964600.1
    XP_038296192.1
    XP_038316610.1
    XP_038316611.1
    XP_038370805.1
    XP_038370806.1
    XP_038370807.1
    XP_038370808.1
    XP_038434436.1
    XP_038434437.1
    XP_038434438.1
    XP_038434439.1
    XP_038498602.1
    XP_038498603.1
    XP_038498604.1
    XP_038498605.1
    XP_534989.4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051832.1 Reference ROS_Cfam_1.0

      Range
      13344541..13371085 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038440264.1 → XP_038296192.1  LOW QUALITY PROTEIN: carboxypeptidase N catalytic chain isoform X1

      UniProtKB/TrEMBL
      A0A8C0T756, A0A8I3NYS7
      Related
      ENSCAFP00845022581.1, ENSCAFT00845028689.1
      Conserved Domains (2) summary
      cd11308
      Location:341 → 415
      Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
      cl11393
      Location:25 → 337
      Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049288.1 Alternate UMICH_Zoey_3.1

      Range
      12891401..12925017 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038514879.1 → XP_038370807.1  carboxypeptidase N catalytic chain isoform X4

      Conserved Domains (2) summary
      cd11308
      Location:274 → 348
      Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
      cl11393
      Location:8 → 270
      Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

    2. XM_038514878.1 → XP_038370806.1  carboxypeptidase N catalytic chain isoform X3

      Conserved Domains (2) summary
      cd11308
      Location:280 → 354
      Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
      cl11393
      Location:25 → 276
      Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

    3. XM_038514877.1 → XP_038370805.1  carboxypeptidase N catalytic chain isoform X2

    4. XM_038514880.1 → XP_038370808.1  carboxypeptidase N catalytic chain isoform X5

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049769.1 Alternate UNSW_CanFamBas_1.0

      Range
      12929454..12963113 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038642676.1 → XP_038498604.1  carboxypeptidase N catalytic chain isoform X8

      Conserved Domains (2) summary
      cd11308
      Location:274 → 348
      Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
      cl11393
      Location:8 → 270
      Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

    2. XM_038642675.1 → XP_038498603.1  carboxypeptidase N catalytic chain isoform X7

      Conserved Domains (2) summary
      cd11308
      Location:280 → 354
      Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
      cl11393
      Location:25 → 276
      Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

    3. XM_038642674.1 → XP_038498602.1  carboxypeptidase N catalytic chain isoform X6

    4. XM_038642677.1 → XP_038498605.1  carboxypeptidase N catalytic chain isoform X9

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049249.1 Alternate UU_Cfam_GSD_1.0

      Range
      13063739..13097391 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038578510.1 → XP_038434438.1  carboxypeptidase N catalytic chain isoform X12

      UniProtKB/TrEMBL
      A0A8C0T756
      Conserved Domains (2) summary
      cd11308
      Location:274 → 348
      Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
      cl11393
      Location:8 → 270
      Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

    2. XM_038578509.1 → XP_038434437.1  carboxypeptidase N catalytic chain isoform X11

      UniProtKB/TrEMBL
      A0A8C0T756
      Conserved Domains (2) summary
      cd11308
      Location:280 → 354
      Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
      cl11393
      Location:25 → 276
      Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

    3. XM_038578508.1 → XP_038434436.1  carboxypeptidase N catalytic chain isoform X10

      UniProtKB/TrEMBL
      A0A8C0QX57, A0A8C0T756, A0A8P0SEL5

    4. XM_038578511.1 → XP_038434439.1  carboxypeptidase N catalytic chain isoform X13

      UniProtKB/TrEMBL
      A0A8C0T756

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006610.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      13059343..13092971 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038460683.1 → XP_038316611.1  carboxypeptidase N catalytic chain isoform X16

      UniProtKB/TrEMBL
      A0A8C0T756
      Conserved Domains (2) summary
      cd11308
      Location:274 → 348
      Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
      cl11393
      Location:8 → 270
      Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

    2. XM_038460682.1 → XP_038316610.1  carboxypeptidase N catalytic chain isoform X15

      UniProtKB/TrEMBL
      A0A8C0T756
      Conserved Domains (2) summary
      cd11308
      Location:280 → 354
      Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
      cl11393
      Location:25 → 276
      Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

    3. XM_534989.7 → XP_534989.4  carboxypeptidase N catalytic chain isoform X14

      UniProtKB/TrEMBL
      A0A8C0QX57, A0A8C0T756, A0A8P0SEL5
      Conserved Domains (2) summary
      cd11308
      Location:341 → 415
      Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
      cl11393
      Location:25 → 337
      Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

    4. XM_014109125.3 → XP_013964600.1  carboxypeptidase N catalytic chain isoform X17

      UniProtKB/TrEMBL
      A0A8C0T756
      Conserved Domains (2) summary
      cd11308
      Location:270 → 344
      Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
      cl11393
      Location:4 → 266
      Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins
    Nucleotide Protein
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