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    EIF4B eukaryotic translation initiation factor 4B [ Canis lupus familiaris (dog) ]

    Gene ID: 477600, updated on 17-Aug-2024

    Summary

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    Official Symbol
    EIF4Bprovided by VGNC
    Official Full Name
    eukaryotic translation initiation factor 4Bprovided by VGNC
    Primary source
    VGNC:VGNC:40282
    See related
    Ensembl:ENSCAFG00845023395
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 27
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (2119865..2151670, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (44101792..44134056)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (44500659..44532693)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (2138361..2168502, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (2122915..2154675, complement)

    Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene SPRY domain containing 3 Neighboring gene uncharacterized LOC111092793 Neighboring gene uncharacterized LOC102156972 Neighboring gene tensin 2 Neighboring gene uncharacterized LOC102156665 Neighboring gene keratin 18

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    eukaryotic translation initiation factor 4B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051831.1 Reference ROS_Cfam_1.0

      Range
      2119865..2151670 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038438101.1 → XP_038294029.1  eukaryotic translation initiation factor 4B isoform X4

      UniProtKB/TrEMBL
      A0A8C0PPY6, A0A8I3PJS8
      Related
      ENSCAFP00845032580.1, ENSCAFT00845041555.1
      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 608
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    2. XM_038438100.1 → XP_038294028.1  eukaryotic translation initiation factor 4B isoform X3

      UniProtKB/TrEMBL
      A0A8C0PPY6, A0A8I3PJS8
      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 609
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    3. XM_038438099.1 → XP_038294027.1  eukaryotic translation initiation factor 4B isoform X2

      UniProtKB/TrEMBL
      A0A8C0PI66, A0A8C0PPY6, A0A8I3PJS8, A0A8I3S3N6
      Related
      ENSCAFP00845032509.1, ENSCAFT00845041459.1
      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 613
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    4. XM_038438098.1 → XP_038294026.1  eukaryotic translation initiation factor 4B isoform X1

      UniProtKB/TrEMBL
      A0A8C0PPY6, A0A8I3PJS8, A0A8P0SCF6
      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 614
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049287.1 Alternate UMICH_Zoey_3.1

      Range
      2138361..2168502 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038512791.1 → XP_038368719.1  eukaryotic translation initiation factor 4B isoform X4

      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 608
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    2. XM_038512790.1 → XP_038368718.1  eukaryotic translation initiation factor 4B isoform X3

      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 609
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    3. XM_038512789.1 → XP_038368717.1  eukaryotic translation initiation factor 4B isoform X2

      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 613
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    4. XM_038512788.1 → XP_038368716.1  eukaryotic translation initiation factor 4B isoform X1

      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 614
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

      Range
      2122915..2154675 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038640556.1 → XP_038496484.1  eukaryotic translation initiation factor 4B isoform X4

      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 608
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    2. XM_038640555.1 → XP_038496483.1  eukaryotic translation initiation factor 4B isoform X3

      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 609
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    3. XM_038640554.1 → XP_038496482.1  eukaryotic translation initiation factor 4B isoform X2

      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 613
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    4. XM_038640553.1 → XP_038496481.1  eukaryotic translation initiation factor 4B isoform X1

      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 614
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

      Range
      44500659..44532693
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038577748.1 → XP_038433676.1  eukaryotic translation initiation factor 4B isoform X1

      UniProtKB/TrEMBL
      A0A8C0PPY6, A0A8I3PJS8, A0A8P0SCF6
      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 614
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    2. XM_038577749.1 → XP_038433677.1  eukaryotic translation initiation factor 4B isoform X2

      UniProtKB/TrEMBL
      A0A8C0PI66, A0A8C0PPY6, A0A8I3PJS8, A0A8I3S3N6
      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 613
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    3. XM_038577751.1 → XP_038433679.1  eukaryotic translation initiation factor 4B isoform X3

      UniProtKB/TrEMBL
      A0A8C0PPY6, A0A8I3PJS8
      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 609
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    4. XM_038577752.1 → XP_038433680.1  eukaryotic translation initiation factor 4B isoform X4

      UniProtKB/TrEMBL
      A0A8C0PPY6, A0A8I3PJS8
      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 608
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      44101792..44134056
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005636787.4 → XP_005636844.1  eukaryotic translation initiation factor 4B isoform X1

      UniProtKB/TrEMBL
      A0A8C0PPY6, A0A8I3PJS8, A0A8P0SCF6
      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 614
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    2. XM_005636788.4 → XP_005636845.1  eukaryotic translation initiation factor 4B isoform X2

      UniProtKB/TrEMBL
      A0A8C0PI66, A0A8C0PPY6, A0A8I3PJS8, A0A8I3S3N6
      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 613
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    3. XM_005636789.4 → XP_005636846.1  eukaryotic translation initiation factor 4B isoform X3

      UniProtKB/TrEMBL
      A0A8C0PPY6, A0A8I3PJS8
      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 609
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

    4. XM_853812.6 → XP_858905.2  eukaryotic translation initiation factor 4B isoform X4

      UniProtKB/TrEMBL
      A0A8C0PPY6, A0A8I3PJS8
      Conserved Domains (3) summary
      PRK12678
      Location:158 → 273
      PRK12678; transcription termination factor Rho; Provisional
      PTZ00108
      Location:372 → 608
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      cd12402
      Location:94 → 175
      RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins
    Nucleotide Protein
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