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    UFM1 ubiquitin fold modifier 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 477297, updated on 17-Aug-2024

    Summary

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    Official Symbol
    UFM1provided by VGNC
    Official Full Name
    ubiquitin fold modifier 1provided by VGNC
    Primary source
    VGNC:VGNC:54385
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See UFM1 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 25 NC_051829.1 (2626565..2645488, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 25 NC_006607.4 (2623588..2642507, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 25 NC_049246.1 (2591732..2610662, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 25 NC_049285.1 (2525768..2544679, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 25 NC_049766.1 (2520179..2540424, complement)

    Chromosome 25 - NC_051829.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S19-like Neighboring gene uncharacterized LOC111092433 Neighboring gene uncharacterized LOC111092432 Neighboring gene uncharacterized LOC111092431 Neighboring gene small nucleolar RNA SNORA52

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein K69-linked ufmylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin fold modifier 1; ubiquitin-fold modifier 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051829.1 Reference ROS_Cfam_1.0

      Range
      2626565..2645488 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038434749.1 → XP_038290677.1  ubiquitin-fold modifier 1 isoform X2

      Conserved Domains (1) summary
      cl28922
      Location:4 → 64
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    2. XM_038434748.1 → XP_038290676.1  ubiquitin-fold modifier 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0QHL4
      Conserved Domains (1) summary
      cd01766
      Location:4 → 78
      Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

    3. XM_038434750.1 → XP_038290678.1  ubiquitin-fold modifier 1 isoform X3

      Conserved Domains (1) summary
      cl28922
      Location:4 → 63
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    4. XM_038434747.1 → XP_038290675.1  ubiquitin-fold modifier 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0QHL4
      Conserved Domains (1) summary
      cd01766
      Location:4 → 78
      Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

    5. XM_038434746.1 → XP_038290674.1  ubiquitin-fold modifier 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0QHL4
      Conserved Domains (1) summary
      cd01766
      Location:4 → 78
      Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

    RNA

    1. XR_005301476.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049285.1 Alternate UMICH_Zoey_3.1

      Range
      2525768..2544679 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038509743.1 → XP_038365671.1  ubiquitin-fold modifier 1 isoform X2

      Conserved Domains (1) summary
      cl28922
      Location:4 → 64
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    2. XM_038509742.1 → XP_038365670.1  ubiquitin-fold modifier 1 isoform X1

      Conserved Domains (1) summary
      cd01766
      Location:4 → 78
      Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

    3. XM_038509744.1 → XP_038365672.1  ubiquitin-fold modifier 1 isoform X3

      Conserved Domains (1) summary
      cl28922
      Location:4 → 63
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    4. XM_038509741.1 → XP_038365669.1  ubiquitin-fold modifier 1 isoform X1

      Conserved Domains (1) summary
      cd01766
      Location:4 → 78
      Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

    5. XM_038509740.1 → XP_038365668.1  ubiquitin-fold modifier 1 isoform X1

      Conserved Domains (1) summary
      cd01766
      Location:4 → 78
      Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

    RNA

    1. XR_005344478.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049766.1 Alternate UNSW_CanFamBas_1.0

      Range
      2520179..2540424 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038637439.1 → XP_038493367.1  ubiquitin-fold modifier 1 isoform X2

      Conserved Domains (1) summary
      cl28922
      Location:4 → 64
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    2. XM_038637438.1 → XP_038493366.1  ubiquitin-fold modifier 1 isoform X1

      Conserved Domains (1) summary
      cd01766
      Location:4 → 78
      Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

    3. XM_038637440.1 → XP_038493368.1  ubiquitin-fold modifier 1 isoform X3

      Conserved Domains (1) summary
      cl28922
      Location:4 → 63
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    4. XM_038637437.1 → XP_038493365.1  ubiquitin-fold modifier 1 isoform X1

      Conserved Domains (1) summary
      cd01766
      Location:4 → 78
      Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

    5. XM_038637436.1 → XP_038493364.1  ubiquitin-fold modifier 1 isoform X1

      Conserved Domains (1) summary
      cd01766
      Location:4 → 78
      Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

    RNA

    1. XR_005412201.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049246.1 Alternate UU_Cfam_GSD_1.0

      Range
      2591732..2610662 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038573174.1 → XP_038429102.1  ubiquitin-fold modifier 1 isoform X2

      Conserved Domains (1) summary
      cl28922
      Location:4 → 64
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    2. XM_038573172.1 → XP_038429100.1  ubiquitin-fold modifier 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0QHL4
      Conserved Domains (1) summary
      cd01766
      Location:4 → 78
      Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

    3. XM_038573175.1 → XP_038429103.1  ubiquitin-fold modifier 1 isoform X3

      Conserved Domains (1) summary
      cl28922
      Location:4 → 63
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    4. XM_038573171.1 → XP_038429099.1  ubiquitin-fold modifier 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0QHL4
      Conserved Domains (1) summary
      cd01766
      Location:4 → 78
      Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

    5. XM_038573170.1 → XP_038429098.1  ubiquitin-fold modifier 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0QHL4
      Conserved Domains (1) summary
      cd01766
      Location:4 → 78
      Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

    RNA

    1. XR_005378310.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006607.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      2623588..2642507 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005635420.4 → XP_005635477.2  ubiquitin-fold modifier 1 isoform X2

      Conserved Domains (1) summary
      cl28922
      Location:4 → 64
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    2. XM_022410013.2 → XP_022265721.2  ubiquitin-fold modifier 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0QHL4
      Conserved Domains (1) summary
      cd01766
      Location:4 → 78
      Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

    3. XM_022410014.2 → XP_022265722.2  ubiquitin-fold modifier 1 isoform X3

      Conserved Domains (1) summary
      cl28922
      Location:4 → 63
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    4. XM_022410012.2 → XP_022265720.2  ubiquitin-fold modifier 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0QHL4
      Conserved Domains (1) summary
      cd01766
      Location:4 → 78
      Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

    5. XM_534489.7 → XP_534489.4  ubiquitin-fold modifier 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0QHL4
      Conserved Domains (1) summary
      cd01766
      Location:4 → 78
      Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

    RNA

    1. XR_005314794.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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