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    SLC38A3 solute carrier family 38 member 3 [ Canis lupus familiaris (dog) ]

    Gene ID: 476617, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC38A3provided by VGNC
    Official Full Name
    solute carrier family 38 member 3provided by VGNC
    Primary source
    VGNC:VGNC:46394
    See related
    Ensembl:ENSCAFG00845022782
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See SLC38A3 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (39464652..39478831, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (39029425..39043601, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (39515831..39530233, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (38832227..38846403, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (39236334..39250516, complement)

    Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119864689 Neighboring gene G protein subunit alpha i2 Neighboring gene uncharacterized LOC119864586 Neighboring gene G protein subunit alpha transducin 1 Neighboring gene semaphorin 3F

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-asparagine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-glutamine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-histidine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in amino acid transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in asparagine transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glutamine transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in histidine transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium-coupled neutral amino acid transporter 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051824.1 Reference ROS_Cfam_1.0

      Range
      39464652..39478831 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038427700.1 → XP_038283628.1  sodium-coupled neutral amino acid transporter 3

      UniProtKB/TrEMBL
      A0A8C0N5I9, A0A8C0R5Q1, A0A8I3PCG7
      Related
      ENSCAFP00845031629.1, ENSCAFT00845040394.1
      Conserved Domains (1) summary
      pfam01490
      Location:64 → 491
      Aa_trans; Transmembrane amino acid transporter protein

    2. XM_038427701.1 → XP_038283629.1  sodium-coupled neutral amino acid transporter 3

      UniProtKB/TrEMBL
      A0A8C0N5I9, A0A8C0R5Q1, A0A8I3PCG7
      Conserved Domains (1) summary
      pfam01490
      Location:64 → 491
      Aa_trans; Transmembrane amino acid transporter protein

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049280.1 Alternate UMICH_Zoey_3.1

      Range
      38832227..38846403 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038503386.1 → XP_038359314.1  sodium-coupled neutral amino acid transporter 3

      Conserved Domains (1) summary
      pfam01490
      Location:64 → 491
      Aa_trans; Transmembrane amino acid transporter protein

    2. XM_038503387.1 → XP_038359315.1  sodium-coupled neutral amino acid transporter 3

      Conserved Domains (1) summary
      pfam01490
      Location:64 → 491
      Aa_trans; Transmembrane amino acid transporter protein

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

      Range
      39236334..39250516 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038630537.1 → XP_038486465.1  sodium-coupled neutral amino acid transporter 3

      Conserved Domains (1) summary
      pfam01490
      Location:64 → 491
      Aa_trans; Transmembrane amino acid transporter protein

    2. XM_038630538.1 → XP_038486466.1  sodium-coupled neutral amino acid transporter 3

      Conserved Domains (1) summary
      pfam01490
      Location:64 → 491
      Aa_trans; Transmembrane amino acid transporter protein

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

      Range
      39515831..39530233 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038566387.1 → XP_038422315.1  sodium-coupled neutral amino acid transporter 3

      UniProtKB/TrEMBL
      A0A8C0N5I9, A0A8C0R5Q1, A0A8I3PCG7
      Conserved Domains (1) summary
      pfam01490
      Location:64 → 491
      Aa_trans; Transmembrane amino acid transporter protein

    2. XM_038566388.1 → XP_038422316.1  sodium-coupled neutral amino acid transporter 3

      UniProtKB/TrEMBL
      A0A8C0N5I9, A0A8C0R5Q1, A0A8I3PCG7
      Conserved Domains (1) summary
      pfam01490
      Location:64 → 491
      Aa_trans; Transmembrane amino acid transporter protein

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      39029425..39043601 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_533820.6 → XP_533820.1  sodium-coupled neutral amino acid transporter 3

      See identical proteins and their annotated locations for XP_533820.1

      UniProtKB/TrEMBL
      A0A8C0N5I9, A0A8C0R5Q1, A0A8I3PCG7
      Conserved Domains (1) summary
      pfam01490
      Location:64 → 491
      Aa_trans; Transmembrane amino acid transporter protein

    2. XM_005632515.4 → XP_005632572.1  sodium-coupled neutral amino acid transporter 3

      See identical proteins and their annotated locations for XP_005632572.1

      UniProtKB/TrEMBL
      A0A8C0N5I9, A0A8C0R5Q1, A0A8I3PCG7
      Conserved Domains (1) summary
      pfam01490
      Location:64 → 491
      Aa_trans; Transmembrane amino acid transporter protein
    Nucleotide Protein
    Heading Accession and Version

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