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    TAMM41 TAM41 mitochondrial translocator assembly and maintenance homolog [ Canis lupus familiaris (dog) ]

    Gene ID: 476532, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TAMM41provided by VGNC
    Official Full Name
    TAM41 mitochondrial translocator assembly and maintenance homologprovided by VGNC
    Primary source
    VGNC:VGNC:108261
    See related
    Ensembl:ENSCAFG00845005937
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    C3orf31; C20H3orf31
    Orthologs
    human mouse all
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    Genomic context

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    See TAMM41 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (6679865..6732435)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (6689071..6739976)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (6727103..6776945)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (6400911..6450672)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (6755799..6807007)

    Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119864631 Neighboring gene 60S ribosomal protein L4-like Neighboring gene copper transport protein ATOX1-like Neighboring gene vestigial like family member 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidate cytidylyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in CDP-diacylglycerol biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cardiolipin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatidate cytidylyltransferase, mitochondrial
    NP_001193864.1
    XP_038282341.1
    XP_038282342.1
    XP_038282343.1
    XP_038282344.1
    XP_038282345.1
    XP_038282346.1
    XP_038282347.1
    XP_038282348.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206935.2 → NP_001193864.1  phosphatidate cytidylyltransferase, mitochondrial

      See identical proteins and their annotated locations for NP_001193864.1

      Status: VALIDATED

      Source sequence(s)
      JAAUVH010000291
      UniProtKB/TrEMBL
      A0A8C0TJF0, A0A8C0Z4N5, A0A8I3NCU4, A0A8I3NCW0
      Related
      ENSCAFP00845008179.1, ENSCAFT00845010516.1
      Conserved Domains (1) summary
      pfam09139
      Location:13 → 327
      Mmp37; Mitochondrial matrix Mmp37

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051824.1 Reference ROS_Cfam_1.0

      Range
      6679865..6732435
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038426413.1 → XP_038282341.1  phosphatidate cytidylyltransferase, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A8C0TJF0, A0A8I3NCW0
      Conserved Domains (1) summary
      pfam09139
      Location:1 → 280
      Mmp37; Mitochondrial matrix Mmp37

    2. XM_038426414.1 → XP_038282342.1  phosphatidate cytidylyltransferase, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A8C0TJF0, A0A8I3NCW0
      Conserved Domains (1) summary
      pfam09139
      Location:13 → 277
      Mmp37; Mitochondrial matrix Mmp37

    3. XM_038426416.1 → XP_038282344.1  phosphatidate cytidylyltransferase, mitochondrial isoform X4

      Conserved Domains (1) summary
      pfam09139
      Location:13 → 235
      Mmp37; Mitochondrial matrix Mmp37

    4. XM_038426415.1 → XP_038282343.1  phosphatidate cytidylyltransferase, mitochondrial isoform X3

      UniProtKB/TrEMBL
      A0A8C0TJF0, A0A8I3NCW0
      Conserved Domains (1) summary
      pfam09139
      Location:13 → 266
      Mmp37; Mitochondrial matrix Mmp37

    5. XM_038426418.1 → XP_038282346.1  phosphatidate cytidylyltransferase, mitochondrial isoform X5

      Conserved Domains (1) summary
      pfam09139
      Location:3 → 185
      Mmp37; Mitochondrial matrix Mmp37

    6. XM_038426417.1 → XP_038282345.1  phosphatidate cytidylyltransferase, mitochondrial isoform X5

      Conserved Domains (1) summary
      pfam09139
      Location:3 → 185
      Mmp37; Mitochondrial matrix Mmp37

    7. XM_038426420.1 → XP_038282348.1  phosphatidate cytidylyltransferase, mitochondrial isoform X5

      Conserved Domains (1) summary
      pfam09139
      Location:3 → 185
      Mmp37; Mitochondrial matrix Mmp37

    8. XM_038426419.1 → XP_038282347.1  phosphatidate cytidylyltransferase, mitochondrial isoform X5

      Conserved Domains (1) summary
      pfam09139
      Location:3 → 185
      Mmp37; Mitochondrial matrix Mmp37

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049280.1 Alternate UMICH_Zoey_3.1

      Range
      6400911..6450672
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

      Range
      6755799..6807007
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

      Range
      6727103..6776945
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      6689071..6739976
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials