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    FBL fibrillarin [ Canis lupus familiaris (dog) ]

    Gene ID: 476460, updated on 17-Aug-2024

    Summary

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    Official Symbol
    FBLprovided by VGNC
    Official Full Name
    fibrillarinprovided by VGNC
    Primary source
    VGNC:VGNC:40748
    See related
    Ensembl:ENSCAFG00845004182
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See FBL in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (114233485..114244396)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (113036931..113047842)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (114419243..114430150)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (113791323..113802229)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (113424985..113435889)

    Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene proteasome 26S subunit, ATPase 4 Neighboring gene Fc gamma binding protein Neighboring gene dual specificity tyrosine phosphorylation regulated kinase 1B Neighboring gene leucine twenty homeobox

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone H2AQ104 methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables rRNA methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in box C/D sno(s)RNA 3'-end processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in rRNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Cajal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of box C/D methylation guide snoRNP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of small-subunit processome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rRNA 2'-O-methyltransferase fibrillarin
    XP_013975919.1
    XP_038324082.1
    XP_038384832.1
    XP_038449102.1
    XP_038512927.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051805.1 Reference ROS_Cfam_1.0

      Range
      114233485..114244396
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038656999.1 → XP_038512927.1  rRNA 2'-O-methyltransferase fibrillarin

      UniProtKB/TrEMBL
      A0A8C0R9Q1, A0A8I3MM38, A0A8P0SAZ5
      Related
      ENSCAFP00845005926.1, ENSCAFT00845007496.1
      Conserved Domains (1) summary
      PTZ00146
      Location:74 → 312
      PTZ00146; fibrillarin; Provisional

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049261.1 Alternate UMICH_Zoey_3.1

      Range
      113791323..113802229
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038468154.1 → XP_038324082.1  rRNA 2'-O-methyltransferase fibrillarin

      Conserved Domains (1) summary
      PTZ00146
      Location:74 → 312
      PTZ00146; fibrillarin; Provisional

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

      Range
      113424985..113435889
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038593174.1 → XP_038449102.1  rRNA 2'-O-methyltransferase fibrillarin

      Conserved Domains (1) summary
      PTZ00146
      Location:74 → 312
      PTZ00146; fibrillarin; Provisional

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

      Range
      114419243..114430150
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038528904.1 → XP_038384832.1  rRNA 2'-O-methyltransferase fibrillarin

      UniProtKB/TrEMBL
      A0A8C0R9Q1, A0A8I3MM38, A0A8P0SAZ5
      Conserved Domains (1) summary
      PTZ00146
      Location:74 → 312
      PTZ00146; fibrillarin; Provisional

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      113036931..113047842
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014120444.3 → XP_013975919.1  rRNA 2'-O-methyltransferase fibrillarin

      UniProtKB/TrEMBL
      A0A8C0R9Q1, A0A8I3MM38, A0A8P0SAZ5
      Conserved Domains (1) summary
      PTZ00146
      Location:74 → 312
      PTZ00146; fibrillarin; Provisional
    Nucleotide Protein
    Heading Accession and Version

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