U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    TNNT1 troponin T1, slow skeletal type [ Canis lupus familiaris (dog) ]

    Gene ID: 476383, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TNNT1provided by VGNC
    Official Full Name
    troponin T1, slow skeletal typeprovided by VGNC
    Primary source
    VGNC:VGNC:47690
    See related
    Ensembl:ENSCAFG00845001030
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TNNT1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (103133191..103144315)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (102536670..102547827)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (103245737..103256895)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (102770115..102781270)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (102481708..102492858)

    Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene dynein axonemal assembly factor 3 Neighboring gene uncharacterized LOC119870906 Neighboring gene troponin I3, cardiac type Neighboring gene protein phosphatase 1 regulatory subunit 12C Neighboring gene EPS8 signaling adaptor L1 Neighboring gene retinol dehydrogenase 13

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables tropomyosin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables troponin T binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sarcomere organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in slow-twitch skeletal muscle fiber contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of troponin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    troponin T, slow skeletal muscle

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051805.1 Reference ROS_Cfam_1.0

      Range
      103133191..103144315
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038655954.1 → XP_038511882.1  troponin T, slow skeletal muscle isoform X1

      UniProtKB/TrEMBL
      A0A8C0YR59, A0A8I3MJG9, A0A8P0N5P2
      Related
      ENSCAFP00845001444.1, ENSCAFT00845001832.1
      Conserved Domains (1) summary
      pfam00992
      Location:69 → 205
      Troponin

    2. XM_038655955.1 → XP_038511883.1  troponin T, slow skeletal muscle isoform X2

      UniProtKB/TrEMBL
      A0A8C0YR59
      Conserved Domains (1) summary
      pfam00992
      Location:58 → 194
      Troponin

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049261.1 Alternate UMICH_Zoey_3.1

      Range
      102770115..102781270
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038467147.1 → XP_038323075.1  troponin T, slow skeletal muscle isoform X1

      Conserved Domains (1) summary
      pfam00992
      Location:69 → 205
      Troponin

    2. XM_038467148.1 → XP_038323076.1  troponin T, slow skeletal muscle isoform X2

      Conserved Domains (1) summary
      pfam00992
      Location:58 → 194
      Troponin

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

      Range
      102481708..102492858
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038592158.1 → XP_038448086.1  troponin T, slow skeletal muscle isoform X1

      Conserved Domains (1) summary
      pfam00992
      Location:69 → 205
      Troponin

    2. XM_038592159.1 → XP_038448087.1  troponin T, slow skeletal muscle isoform X2

      Conserved Domains (1) summary
      pfam00992
      Location:58 → 194
      Troponin

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

      Range
      103245737..103256895
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038527874.1 → XP_038383802.1  troponin T, slow skeletal muscle isoform X1

      UniProtKB/TrEMBL
      A0A8C0YR59, A0A8I3MJG9, A0A8P0N5P2
      Conserved Domains (1) summary
      pfam00992
      Location:69 → 205
      Troponin

    2. XM_038527875.1 → XP_038383803.1  troponin T, slow skeletal muscle isoform X2

      UniProtKB/TrEMBL
      A0A8C0YR59
      Conserved Domains (1) summary
      pfam00992
      Location:58 → 194
      Troponin

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      102536670..102547827
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005616168.3 → XP_005616225.1  troponin T, slow skeletal muscle isoform X1

      UniProtKB/TrEMBL
      A0A8C0YR59, A0A8I3MJG9, A0A8P0N5P2
      Conserved Domains (1) summary
      pfam00992
      Location:69 → 205
      Troponin

    2. XM_005616171.3 → XP_005616228.1  troponin T, slow skeletal muscle isoform X2

      UniProtKB/TrEMBL
      A0A8C0YR59
      Conserved Domains (1) summary
      pfam00992
      Location:58 → 194
      Troponin
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.