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    EIF4A3 eukaryotic translation initiation factor 4A3 [ Canis lupus familiaris (dog) ]

    Gene ID: 475922, updated on 17-Aug-2024

    Summary

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    Official Symbol
    EIF4A3provided by VGNC
    Official Full Name
    eukaryotic translation initiation factor 4A3provided by VGNC
    Primary source
    VGNC:VGNC:40281
    See related
    Ensembl:ENSCAFG00845013343
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See EIF4A3 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (2215271..2226216)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (2222792..2233743)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (2445388..2456373)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (2238677..2249620)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (2364112..2375060)

    Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene N-sulfoglucosamine sulfohydrolase Neighboring gene caspase recruitment domain family member 14 Neighboring gene dual specificity protein phosphatase 5-like Neighboring gene alpha glucosidase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of catalytic step 2 spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    eukaryotic initiation factor 4A-III
    Names
    eukaryotic translation initiation factor 4A
    XP_038340654.1
    XP_038402301.1
    XP_038466308.1
    XP_038531424.1
    XP_533130.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051813.1 Reference ROS_Cfam_1.0

      Range
      2215271..2226216
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038675496.1 → XP_038531424.1  eukaryotic initiation factor 4A-III

      UniProtKB/TrEMBL
      A0A8C0K5D8, A0A8C0PUX8, A0A8C0RW66, A0A8I3NS82, A0A8I3NSA9
      Related
      ENSCAFP00845018656.1, ENSCAFT00845023772.1
      Conserved Domains (1) summary
      PTZ00424
      Location:35 → 411
      PTZ00424; helicase 45; Provisional

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049269.1 Alternate UMICH_Zoey_3.1

      Range
      2238677..2249620
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038484726.1 → XP_038340654.1  eukaryotic initiation factor 4A-III

      Conserved Domains (1) summary
      PTZ00424
      Location:35 → 411
      PTZ00424; helicase 45; Provisional

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

      Range
      2364112..2375060
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038610380.1 → XP_038466308.1  eukaryotic initiation factor 4A-III

      Conserved Domains (1) summary
      PTZ00424
      Location:35 → 411
      PTZ00424; helicase 45; Provisional

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

      Range
      2445388..2456373
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038546373.1 → XP_038402301.1  eukaryotic initiation factor 4A-III

      UniProtKB/TrEMBL
      A0A8C0M839, A0A8C0MBK5

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      2222792..2233743
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_533130.7 → XP_533130.2  eukaryotic initiation factor 4A-III

      See identical proteins and their annotated locations for XP_533130.2

      UniProtKB/TrEMBL
      A0A8C0K5D8, A0A8C0PUX8, A0A8C0RW66, A0A8I3NS82, A0A8I3NSA9
      Conserved Domains (1) summary
      PTZ00424
      Location:35 → 411
      PTZ00424; helicase 45; Provisional
    Nucleotide Protein
    Heading Accession and Version

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