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    ACTR3B actin related protein 3B [ Canis lupus familiaris (dog) ]

    Gene ID: 475549, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ACTR3Bprovided by VGNC
    Official Full Name
    actin related protein 3Bprovided by VGNC
    Primary source
    VGNC:VGNC:49707
    See related
    Ensembl:ENSCAFG00845011785
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See ACTR3B in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 16 NC_051820.1 (18202406..18287120)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 16 NC_006598.4 (17087180..17171836)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 16 NC_049237.1 (17207225..17292092)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 16 NC_049276.1 (16575306..16660017)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 16 NC_049757.1 (17156385..17241264)

    Chromosome 16 - NC_051820.1Genomic Context describing neighboring genes Neighboring gene X-ray repair cross complementing 2 Neighboring gene uncharacterized LOC111090257 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC111090258 Neighboring gene peroxiredoxin 3 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cortical patch IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    actin-related protein 3B
    Names
    ARP3 actin related protein 3 homolog B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051820.1 Reference ROS_Cfam_1.0

      Range
      18202406..18287120
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038689553.1 → XP_038545481.1  actin-related protein 3B isoform X1

      UniProtKB/TrEMBL
      A0A8C0JY21, A0A8C0NZL3
      Related
      ENSCAFP00845016436.1, ENSCAFT00845020923.1
      Conserved Domains (1) summary
      PTZ00280
      Location:2 → 417
      PTZ00280; Actin-related protein 3; Provisional

    2. XM_038689554.1 → XP_038545482.1  actin-related protein 3B isoform X2

      UniProtKB/TrEMBL
      A0A8C0S2K8, A0A8I3NER0
      Related
      ENSCAFP00845016463.1, ENSCAFT00845020953.1
      Conserved Domains (1) summary
      PTZ00280
      Location:2 → 389
      PTZ00280; Actin-related protein 3; Provisional

    3. XM_038689559.1 → XP_038545487.1  actin-related protein 3B isoform X4

      UniProtKB/TrEMBL
      A0A8I3NGR4, A0A8P0NPJ4
      Related
      ENSCAFP00845016534.1, ENSCAFT00845021033.1
      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 329
      PTZ00280; Actin-related protein 3; Provisional

    4. XM_038689558.1 → XP_038545486.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    5. XM_038689557.1 → XP_038545485.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    6. XM_038689555.1 → XP_038545483.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    7. XM_038689556.1 → XP_038545484.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049276.1 Alternate UMICH_Zoey_3.1

      Range
      16575306..16660017
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038497368.1 → XP_038353296.1  actin-related protein 3B isoform X1

      Conserved Domains (1) summary
      PTZ00280
      Location:2 → 417
      PTZ00280; Actin-related protein 3; Provisional

    2. XM_038497369.1 → XP_038353297.1  actin-related protein 3B isoform X2

      Conserved Domains (1) summary
      PTZ00280
      Location:2 → 389
      PTZ00280; Actin-related protein 3; Provisional

    3. XM_038497374.1 → XP_038353302.1  actin-related protein 3B isoform X4

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 329
      PTZ00280; Actin-related protein 3; Provisional

    4. XM_038497373.1 → XP_038353301.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    5. XM_038497372.1 → XP_038353300.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    6. XM_038497370.1 → XP_038353298.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    7. XM_038497371.1 → XP_038353299.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049757.1 Alternate UNSW_CanFamBas_1.0

      Range
      17156385..17241264
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038623790.1 → XP_038479718.1  actin-related protein 3B isoform X1

      Conserved Domains (1) summary
      PTZ00280
      Location:2 → 417
      PTZ00280; Actin-related protein 3; Provisional

    2. XM_038623791.1 → XP_038479719.1  actin-related protein 3B isoform X2

      Conserved Domains (1) summary
      PTZ00280
      Location:2 → 389
      PTZ00280; Actin-related protein 3; Provisional

    3. XM_038623796.1 → XP_038479724.1  actin-related protein 3B isoform X4

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 329
      PTZ00280; Actin-related protein 3; Provisional

    4. XM_038623795.1 → XP_038479723.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    5. XM_038623794.1 → XP_038479722.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    6. XM_038623792.1 → XP_038479720.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    7. XM_038623793.1 → XP_038479721.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049237.1 Alternate UU_Cfam_GSD_1.0

      Range
      17207225..17292092
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038559785.1 → XP_038415713.1  actin-related protein 3B isoform X1

      UniProtKB/TrEMBL
      A0A8C0JY21, A0A8C0NZL3
      Conserved Domains (1) summary
      PTZ00280
      Location:2 → 417
      PTZ00280; Actin-related protein 3; Provisional

    2. XM_038559786.1 → XP_038415714.1  actin-related protein 3B isoform X2

      UniProtKB/TrEMBL
      A0A8C0S2K8, A0A8I3NER0
      Conserved Domains (1) summary
      PTZ00280
      Location:2 → 389
      PTZ00280; Actin-related protein 3; Provisional

    3. XM_038559791.1 → XP_038415719.1  actin-related protein 3B isoform X4

      UniProtKB/TrEMBL
      A0A8I3NGR4, A0A8P0NPJ4
      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 329
      PTZ00280; Actin-related protein 3; Provisional

    4. XM_038559790.1 → XP_038415718.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    5. XM_038559789.1 → XP_038415717.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    6. XM_038559787.1 → XP_038415715.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    7. XM_038559788.1 → XP_038415716.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006598.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      17087180..17171836
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_532772.6 → XP_532772.3  actin-related protein 3B isoform X1

      See identical proteins and their annotated locations for XP_532772.3

      UniProtKB/TrEMBL
      A0A8C0JY21, A0A8C0NZL3
      Conserved Domains (1) summary
      PTZ00280
      Location:2 → 417
      PTZ00280; Actin-related protein 3; Provisional

    2. XM_022403889.2 → XP_022259597.1  actin-related protein 3B isoform X2

      UniProtKB/TrEMBL
      A0A8C0S2K8, A0A8I3NER0
      Conserved Domains (1) summary
      PTZ00280
      Location:2 → 389
      PTZ00280; Actin-related protein 3; Provisional

    3. XM_005629700.4 → XP_005629757.1  actin-related protein 3B isoform X4

      See identical proteins and their annotated locations for XP_005629757.1

      UniProtKB/TrEMBL
      A0A8I3NGR4, A0A8P0NPJ4
      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 329
      PTZ00280; Actin-related protein 3; Provisional

    4. XM_014119943.3 → XP_013975418.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    5. XM_014119944.3 → XP_013975419.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    6. XM_014119942.2 → XP_013975417.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional

    7. XM_014119946.3 → XP_013975421.1  actin-related protein 3B isoform X3

      Conserved Domains (1) summary
      PTZ00280
      Location:1 → 288
      PTZ00280; Actin-related protein 3; Provisional
    Nucleotide Protein
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