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    GPAA1 glycosylphosphatidylinositol anchor attachment 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 475120, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GPAA1provided by VGNC
    Official Full Name
    glycosylphosphatidylinositol anchor attachment 1provided by VGNC
    Primary source
    VGNC:VGNC:41358
    See related
    Ensembl:ENSCAFG00845007719
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See GPAA1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (38053394..38056568)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (37540819..37543992)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (38330285..38333466)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (37725487..37728658)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (37853701..37856859)

    Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119864653 Neighboring gene uncharacterized LOC119865005 Neighboring gene exosome component 4 Neighboring gene cytochrome c1 Neighboring gene SHANK associated RH domain interactor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Human and mouse GPAA1 (Glycosylphosphatidylinositol anchor attachment 1) genes: genomic structures, chromosome loci and the presence of a minor class intron. Inoue N, et al. Cytogenet Cell Genet, 1999. PMID 10393431
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in attachment of GPI anchor to protein IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of GPI-anchor transamidase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycosylphosphatidylinositol anchor attachment 1 protein
    Names
    GPAA1P anchor attachment protein 1 homolog
    glycosylphosphatidylinositol anchor attachment protein 1 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051817.1 Reference ROS_Cfam_1.0

      Range
      38053394..38056568
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038684592.1 → XP_038540520.1  glycosylphosphatidylinositol anchor attachment 1 protein isoform X1

      UniProtKB/TrEMBL
      A0A8C0PPI5, A0A8C0R3N4, A0A8C0SGN2, A0A8P0S7G3
      Related
      ENSCAFP00845010533.1, ENSCAFT00845013567.1
      Conserved Domains (1) summary
      pfam04114
      Location:126 → 615
      Gaa1; Gaa1-like, GPI transamidase component

    2. XM_038684593.1 → XP_038540521.1  glycosylphosphatidylinositol anchor attachment 1 protein isoform X2

      Conserved Domains (1) summary
      pfam04114
      Location:126 → 421
      Gaa1; Gaa1-like, GPI transamidase component

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049273.1 Alternate UMICH_Zoey_3.1

      Range
      37725487..37728658
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038494072.1 → XP_038350000.1  glycosylphosphatidylinositol anchor attachment 1 protein isoform X1

      Conserved Domains (1) summary
      pfam04114
      Location:126 → 615
      Gaa1; Gaa1-like, GPI transamidase component

    2. XM_038494073.1 → XP_038350001.1  glycosylphosphatidylinositol anchor attachment 1 protein isoform X2

      Conserved Domains (1) summary
      pfam04114
      Location:126 → 421
      Gaa1; Gaa1-like, GPI transamidase component

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

      Range
      37853701..37856859
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038618989.1 → XP_038474917.1  glycosylphosphatidylinositol anchor attachment 1 protein isoform X1

    2. XM_038618990.1 → XP_038474918.1  glycosylphosphatidylinositol anchor attachment 1 protein isoform X2

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

      Range
      38330285..38333466
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038555107.1 → XP_038411035.1  glycosylphosphatidylinositol anchor attachment 1 protein isoform X1

      UniProtKB/TrEMBL
      A0A8C0PPI5, A0A8C0R3N4, A0A8C0SGN2, A0A8P0S7G3
      Conserved Domains (1) summary
      pfam04114
      Location:126 → 615
      Gaa1; Gaa1-like, GPI transamidase component

    2. XM_038555108.1 → XP_038411036.1  glycosylphosphatidylinositol anchor attachment 1 protein isoform X2

      Conserved Domains (1) summary
      pfam04114
      Location:126 → 421
      Gaa1; Gaa1-like, GPI transamidase component

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      37540819..37543992
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_532350.7 → XP_532350.4  glycosylphosphatidylinositol anchor attachment 1 protein isoform X1

      UniProtKB/TrEMBL
      A0A8C0PPI5, A0A8C0R3N4, A0A8C0SGN2, A0A8P0S7G3
      Conserved Domains (1) summary
      pfam04114
      Location:126 → 615
      Gaa1; Gaa1-like, GPI transamidase component

    2. XM_038423566.1 → XP_038279494.1  glycosylphosphatidylinositol anchor attachment 1 protein isoform X2

      Conserved Domains (1) summary
      pfam04114
      Location:126 → 421
      Gaa1; Gaa1-like, GPI transamidase component
    Nucleotide Protein
    Heading Accession and Version

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