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    TMEM30A transmembrane protein 30A [ Canis lupus familiaris (dog) ]

    Gene ID: 474973, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TMEM30Aprovided by VGNC
    Official Full Name
    transmembrane protein 30Aprovided by VGNC
    Primary source
    VGNC:VGNC:47570
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See TMEM30A in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 12 NC_051816.1 (37600304..37636641, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 12 NC_006594.4 (36775533..36811838, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 12 NC_049233.1 (37123319..37159632, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 12 NC_049272.1 (37003886..37040195, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 12 NC_049753.1 (36995300..37031351, complement)

    Chromosome 12 - NC_051816.1Genomic Context describing neighboring genes Neighboring gene protein transport protein Sec61 subunit gamma-like Neighboring gene cytochrome c oxidase subunit 7A2, mitochondrial Neighboring gene uncharacterized LOC111098320 Neighboring gene filamin A interacting protein 1 Neighboring gene uncharacterized LOC119874200

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in phospholipid translocation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cell cycle control protein 50A; LOW QUALITY PROTEIN: cell cycle control protein 50A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051816.1 Reference ROS_Cfam_1.0

      Range
      37600304..37636641 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038683976.1 → XP_038539904.1  LOW QUALITY PROTEIN: cell cycle control protein 50A

      Conserved Domains (1) summary
      pfam03381
      Location:164 → 443
      CDC50; LEM3 (ligand-effect modulator 3) family / CDC50 family

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049272.1 Alternate UMICH_Zoey_3.1

      Range
      37003886..37040195 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038492258.1 → XP_038348186.1  LOW QUALITY PROTEIN: cell cycle control protein 50A

      Conserved Domains (1) summary
      pfam03381
      Location:164 → 443
      CDC50; LEM3 (ligand-effect modulator 3) family / CDC50 family

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049753.1 Alternate UNSW_CanFamBas_1.0

      Range
      36995300..37031351 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038618407.1 → XP_038474335.1  LOW QUALITY PROTEIN: cell cycle control protein 50A

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049233.1 Alternate UU_Cfam_GSD_1.0

      Range
      37123319..37159632 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038554544.1 → XP_038410472.1  LOW QUALITY PROTEIN: cell cycle control protein 50A

      Conserved Domains (1) summary
      pfam03381
      Location:164 → 443
      CDC50; LEM3 (ligand-effect modulator 3) family / CDC50 family

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006594.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      36775533..36811838 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_862371.4 → XP_867464.3  LOW QUALITY PROTEIN: cell cycle control protein 50A

      Conserved Domains (1) summary
      pfam03381
      Location:164 → 443
      CDC50; LEM3 (ligand-effect modulator 3) family / CDC50 family
    Nucleotide Protein
    Heading Accession and Version

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