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    BMP5 bone morphogenetic protein 5 [ Canis lupus familiaris (dog) ]

    Gene ID: 474944, updated on 17-Aug-2024

    Summary

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    Official Symbol
    BMP5provided by VGNC
    Official Full Name
    bone morphogenetic protein 5provided by VGNC
    Primary source
    VGNC:VGNC:38481
    See related
    Ensembl:ENSCAFG00845011840
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See BMP5 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 12 NC_051816.1 (23587541..23700170, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 12 NC_006594.4 (22980188..23092541, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 12 NC_049233.1 (23319382..23432016, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 12 NC_049272.1 (23083296..23195652, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 12 NC_049753.1 (23187441..23299694, complement)

    Chromosome 12 - NC_051816.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119874186 Neighboring gene GDNF family receptor alpha like Neighboring gene 3-hydroxy-3-methylglutaryl-CoA lyase like 1 Neighboring gene uncharacterized LOC111098162 Neighboring gene collagen type XXI alpha 1 chain Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytokine activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables growth factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in SMAD protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    bone morphogenetic protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051816.1 Reference ROS_Cfam_1.0

      Range
      23587541..23700170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038683795.1 → XP_038539723.1  bone morphogenetic protein 5

      UniProtKB/TrEMBL
      A0A8C0NEM6, A0A8I3NK03, A0A8I3RYW2, A0A8P0SZX8
      Related
      ENSCAFP00845016541.1, ENSCAFT00845021041.1
      Conserved Domains (2) summary
      cd19395
      Location:342 → 454
      TGF_beta_BMP5; transforming growth factor beta (TGF-beta) like domain found in bone morphogenetic protein 5 (BMP-5) and similar proteins
      pfam00688
      Location:32 → 304
      TGFb_propeptide; TGF-beta propeptide

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049272.1 Alternate UMICH_Zoey_3.1

      Range
      23083296..23195652 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038492078.1 → XP_038348006.1  bone morphogenetic protein 5

      Conserved Domains (2) summary
      cd19395
      Location:342 → 454
      TGF_beta_BMP5; transforming growth factor beta (TGF-beta) like domain found in bone morphogenetic protein 5 (BMP-5) and similar proteins
      pfam00688
      Location:32 → 304
      TGFb_propeptide; TGF-beta propeptide

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049753.1 Alternate UNSW_CanFamBas_1.0

      Range
      23187441..23299694 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038618226.1 → XP_038474154.1  bone morphogenetic protein 5

      Conserved Domains (2) summary
      cd19395
      Location:342 → 454
      TGF_beta_BMP5; transforming growth factor beta (TGF-beta) like domain found in bone morphogenetic protein 5 (BMP-5) and similar proteins
      pfam00688
      Location:32 → 304
      TGFb_propeptide; TGF-beta propeptide

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049233.1 Alternate UU_Cfam_GSD_1.0

      Range
      23319382..23432016 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038554362.1 → XP_038410290.1  bone morphogenetic protein 5

      UniProtKB/TrEMBL
      A0A8C0NEM6, A0A8I3NK03, A0A8I3RYW2, A0A8P0SZX8
      Conserved Domains (2) summary
      cd19395
      Location:342 → 454
      TGF_beta_BMP5; transforming growth factor beta (TGF-beta) like domain found in bone morphogenetic protein 5 (BMP-5) and similar proteins
      pfam00688
      Location:32 → 304
      TGFb_propeptide; TGF-beta propeptide

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006594.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      22980188..23092541 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_532179.7 → XP_532179.2  bone morphogenetic protein 5

      UniProtKB/TrEMBL
      A0A8C0NEM6, A0A8I3NK03, A0A8I3RYW2, A0A8P0SZX8
      Conserved Domains (2) summary
      cd19395
      Location:342 → 454
      TGF_beta_BMP5; transforming growth factor beta (TGF-beta) like domain found in bone morphogenetic protein 5 (BMP-5) and similar proteins
      pfam00688
      Location:32 → 304
      TGFb_propeptide; TGF-beta propeptide
    Nucleotide Protein
    Heading Accession and Version

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