CCT2 chaperonin containing TCP1 subunit 2 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: CCT2provided by VGNC
Official Full Name: chaperonin containing TCP1 subunit 2provided by VGNC
Primary source: VGNC:VGNC:38922
See related: Ensembl:ENSCAFG00845017606
Gene type: protein coding
RefSeq status: MODEL
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 10

Exon count:: 18

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	10	NC_051814.1 (11683661..11709923)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	10	NC_006592.4 (11492095..11518353)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	10	NC_049231.1 (11920916..11939358)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	10	NC_049270.1 (11550671..11576938)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	10	NC_049751.1 (11797739..11824127)

Chromosome 10 - NC_051814.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

RH48183 (e-PCR)
- UniSTS:28851

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables ATP hydrolysis activity	IEA Inferred from Electronic Annotation more info	PubMed
enables ATP-dependent protein folding chaperone	IEA Inferred from Electronic Annotation more info	PubMed
enables unfolded protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in protein folding	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of chaperonin-containing T-complex	IEA Inferred from Electronic Annotation more info	PubMed
located_in cytosol	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: T-complex protein 1 subunit beta; LOW QUALITY PROTEIN: T-complex protein 1 subunit beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051814.1 Reference ROS_Cfam_1.0

Range

11683661..11709923

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038679320.1 → XP_038535248.1 T-complex protein 1 subunit beta isoform X1

UniProtKB/TrEMBL

A0A8C0R2R3

Conserved Domains (1) summary

cd03336
Location:11 → 526

TCP1_beta; TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL) ...
XM_038679322.1 → XP_038535250.1 T-complex protein 1 subunit beta isoform X3

UniProtKB/TrEMBL

A0A8C0R2R3

Conserved Domains (1) summary

cd03336
Location:11 → 525

TCP1_beta; TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL) ...
XM_038679321.1 → XP_038535249.1 T-complex protein 1 subunit beta isoform X2

UniProtKB/TrEMBL

A0A8C0QNN5, A0A8C0R2R3, A0A8I3NY48

Related

ENSCAFP00845024424.1, ENSCAFT00845031202.1

Conserved Domains (1) summary

cd03336
Location:11 → 527

TCP1_beta; TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL) ...

Alternate UMICH_Zoey_3.1

Genomic

NC_049270.1 Alternate UMICH_Zoey_3.1

Range

11550671..11576938

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038488097.1 → XP_038344025.1 T-complex protein 1 subunit beta isoform X1
XM_038488099.1 → XP_038344027.1 T-complex protein 1 subunit beta isoform X3

Conserved Domains (1) summary

cd03336
Location:11 → 525

TCP1_beta; TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL) ...
XM_038488098.1 → XP_038344026.1 T-complex protein 1 subunit beta isoform X2

Conserved Domains (1) summary

cd03336
Location:11 → 527

TCP1_beta; TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL) ...

Alternate UNSW_CanFamBas_1.0

Genomic

NC_049751.1 Alternate UNSW_CanFamBas_1.0

Range

11797739..11824127

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038613971.1 → XP_038469899.1 T-complex protein 1 subunit beta isoform X1

Conserved Domains (1) summary

cd03336
Location:11 → 526

TCP1_beta; TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL) ...
XM_038613973.1 → XP_038469901.1 T-complex protein 1 subunit beta isoform X3

Conserved Domains (1) summary

cd03336
Location:11 → 525

TCP1_beta; TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL) ...
XM_038613972.1 → XP_038469900.1 T-complex protein 1 subunit beta isoform X2

Conserved Domains (1) summary

cd03336
Location:11 → 527

TCP1_beta; TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL) ...

Alternate UU_Cfam_GSD_1.0

Genomic

NC_049231.1 Alternate UU_Cfam_GSD_1.0

Range

11920916..11939358

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038549988.1 → XP_038405916.1 LOW QUALITY PROTEIN: T-complex protein 1 subunit beta isoform X2

UniProtKB/TrEMBL

A0A8C0QNN5, A0A8C0R2R3, A0A8I3NY48

Conserved Domains (1) summary

cd03336
Location:11 → 527

TCP1_beta; TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL) ...

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

Range

11492095..11518353

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_005625615.3 → XP_005625672.1 T-complex protein 1 subunit beta isoform X1

UniProtKB/TrEMBL

A0A8C0R2R3

Conserved Domains (1) summary

cd03336
Location:11 → 526

TCP1_beta; TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL) ...
XM_005625616.4 → XP_005625673.1 T-complex protein 1 subunit beta isoform X3

UniProtKB/TrEMBL

A0A8C0R2R3

Conserved Domains (1) summary

cd03336
Location:11 → 525

TCP1_beta; TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL) ...
XM_531675.7 → XP_531675.2 T-complex protein 1 subunit beta isoform X2

UniProtKB/TrEMBL

A0A8C0QNN5, A0A8C0R2R3, A0A8I3NY48

Conserved Domains (1) summary

cd03336
Location:11 → 527

TCP1_beta; TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL) ...