nitr7b novel immune-type receptor 7b [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: nitr7bprovided by ZNC
Official Full Name: novel immune-type receptor 7bprovided by ZNC
Primary source: ZFIN:ZDB-GENE-041001-8
See related: Ensembl:ENSDARG00000067977 AllianceGenome:ZFIN:ZDB-GENE-041001-8
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: nitr7.1; nitr7.4; nitr7.5; nitr7.6; nitr7.8; nitr7b_2; nitr7b_3; nitr7b_4
Summary: Predicted to be involved in response to bacterium. Predicted to be located in membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 7

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	7	NC_007118.7 (17393794..17398062)
105	previous assembly	GRCz10 (GCF_000002035.5)	7	NC_007118.6 (17141821..17145960)

Chromosome 7 - NC_007118.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in response to bacterium	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

Go to the top of the page Help

Preferred Names: novel immune-type receptor 7b

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001005578.2 → NP_001005578.2 novel immune-type receptor 7b precursor

Status: VALIDATED

Source sequence(s)

CU179759

UniProtKB/TrEMBL

Q5VTP3, Q5YCY9

Related

ENSDARP00000059672.2, ENSDART00000059673.3

Conserved Domains (1) summary

pfam07686
Location:27 → 130

V-set; Immunoglobulin V-set domain