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    UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 [ Ovis aries (sheep) ]

    Gene ID: 443296, updated on 10-Oct-2024

    Summary

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    Gene symbol
    UBA52
    Gene description
    ubiquitin A-52 residue ribosomal protein fusion product 1
    See related
    EnsemblRapid:ENSOARG00020004308
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Also known as
    UBCEP2; OVUBQ-L40
    Orthologs
    human mouse all
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    Genomic context

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    See UBA52 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 5 NC_056058.1 (4424428..4426830, complement)

    Chromosome 5 - NC_056058.1Genomic Context describing neighboring genes Neighboring gene cytokine receptor like factor 1 Neighboring gene required for excision 1-B domain containing Neighboring gene KxDL motif containing 1 Neighboring gene uncharacterized LOC114114983

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056058.1 Chromosome 5 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein tag activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in modification-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin-ribosomal protein eL40 fusion protein
    Names
    60S ribosomal protein L40
    CEP52
    ubiqitin RPL40 fusion protein
    ubiquitin-60S ribosomal protein L40

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001009286.1 → NP_001009286.1  ubiquitin-ribosomal protein eL40 fusion protein

      See identical proteins and their annotated locations for NP_001009286.1

      Status: PROVISIONAL

      Source sequence(s)
      AY563026
      UniProtKB/Swiss-Prot
      O46543, P0C276, Q6Q310
      UniProtKB/TrEMBL
      A0A836D2E6, W5P3M9
      Conserved Domains (2) summary
      cd01803
      Location:1 → 76
      Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
      pfam01020
      Location:79 → 126
      Ribosomal_L40e; Ribosomal L40e family

    RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Genomic

    1. NC_056058.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

      Range
      4424428..4426830 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012177581.3 → XP_012032971.1  ubiquitin-ribosomal protein eL40 fusion protein isoform X2

      See identical proteins and their annotated locations for XP_012032971.1

      UniProtKB/Swiss-Prot
      O46543, P0C276, Q6Q310
      UniProtKB/TrEMBL
      A0A836D2E6, W5P3M9
      Related
      ENSOARP00020005441.1, ENSOART00020006603.2
      Conserved Domains (2) summary
      cd01803
      Location:1 → 76
      Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
      pfam01020
      Location:79 → 126
      Ribosomal_L40e; Ribosomal L40e family

    2. XM_060415322.1 → XP_060271305.1  ubiquitin-ribosomal protein eL40 fusion protein isoform X1

    3. XM_042249397.1 → XP_042105331.1  ubiquitin-ribosomal protein eL40 fusion protein isoform X2

      UniProtKB/Swiss-Prot
      O46543, P0C276, Q6Q310
      UniProtKB/TrEMBL
      A0A836D2E6, W5P3M9
      Conserved Domains (2) summary
      cd01803
      Location:1 → 76
      Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
      pfam01020
      Location:79 → 126
      Ribosomal_L40e; Ribosomal L40e family
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0C276.2 GenPept UniProtKB/Swiss-Prot:P0C276

    Gene LinkOut

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