acp5b acid phosphatase 5b, tartrate resistant [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: acp5bprovided by ZNC
Official Full Name: acid phosphatase 5b, tartrate resistantprovided by ZNC
Primary source: ZFIN:ZDB-GENE-040718-151
See related: Ensembl:ENSDARG00000101456 AllianceGenome:ZFIN:ZDB-GENE-040718-151
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:92339
Summary: Predicted to enable acid phosphatase activity; ferric iron binding activity; and ferrous iron binding activity. Acts upstream of or within response to mechanical stimulus. Is expressed in scale. Orthologous to human ACP5 (acid phosphatase 5, tartrate resistant). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 24

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	24	NC_007135.7 (31294019..31306724, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	24	NC_007135.6 (31356808..31369513, complement)

Chromosome 24 - NC_007135.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables acid phosphatase activity	IBA Inferred from Biological aspect of Ancestor more info
enables acid phosphatase activity	IEA Inferred from Electronic Annotation more info
enables ferric iron binding	IBA Inferred from Biological aspect of Ancestor more info
enables ferrous iron binding	IBA Inferred from Biological aspect of Ancestor more info
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in bone resorption	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within response to mechanical stimulus	IDA Inferred from Direct Assay more info	PubMed

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: tartrate-resistant acid phosphatase type 5b

Names: trap

NP_001002452.1

EC 3.1.3.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001002452.1 → NP_001002452.1 tartrate-resistant acid phosphatase type 5b precursor

See identical proteins and their annotated locations for NP_001002452.1

Status: PROVISIONAL

Source sequence(s)

BC076019

UniProtKB/TrEMBL

A0A8M1N0J8, Q6DHF5

Related

ENSDARP00000141681.1, ENSDART00000165399.2

Conserved Domains (2) summary

cd07378
Location:29 → 312

MPP_ACP5; Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain

pfam00149
Location:29 → 243

Metallophos; Calcineurin-like phosphoesterase