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    myoz1b myozenin 1b [ Danio rerio (zebrafish) ]

    Gene ID: 436720, updated on 12-Sep-2024

    Summary

    Official Symbol
    myoz1bprovided by ZNC
    Official Full Name
    myozenin 1bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040718-146
    See related
    Ensembl:ENSDARG00000071445 AllianceGenome:ZFIN:ZDB-GENE-040718-146
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:92347
    Summary
    Predicted to enable FATZ binding activity; actin binding activity; and telethonin binding activity. Predicted to be active in Z disc and actin cytoskeleton. Is expressed in myotome. Orthologous to human MYOZ1 (myozenin 1). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    See myoz1b in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (26385246..26408854, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (26293886..26317502, complement)

    Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene opsin 4b Neighboring gene ubiquitin specific peptidase 54b Neighboring gene uncharacterized LOC137496818 Neighboring gene synaptopodin 2-like b Neighboring gene integrin beta 3b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables FATZ binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables actin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables telethonin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in Z disc IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in Z disc IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in actin cytoskeleton IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002447.1NP_001002447.1  myozenin-1b

      See identical proteins and their annotated locations for NP_001002447.1

      Status: PROVISIONAL

      Source sequence(s)
      BC076024
      UniProtKB/TrEMBL
      A7MCH0, Q6DHF0
      Related
      ENSDARP00000096413.3, ENSDART00000105636.5
      Conserved Domains (1) summary
      pfam05556
      Location:1250
      Calsarcin; Calcineurin-binding protein (Calsarcin)

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007123.7 Reference GRCz11 Primary Assembly

      Range
      26385246..26408854 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017358446.3XP_017213935.1  myozenin-1b isoform X1

      UniProtKB/TrEMBL
      A0A286Y919, A0A8M6Z1X3
      Conserved Domains (1) summary
      pfam05556
      Location:1251
      Calsarcin; Calcineurin-binding protein (Calsarcin)
    2. XM_005156285.4XP_005156342.1  myozenin-1b isoform X2

      See identical proteins and their annotated locations for XP_005156342.1

      UniProtKB/TrEMBL
      A7MCH0, Q6DHF0
      Related
      ENSDARP00000122609.1, ENSDART00000131896.2
      Conserved Domains (1) summary
      pfam05556
      Location:1250
      Calsarcin; Calcineurin-binding protein (Calsarcin)
    3. XM_005156283.5XP_005156340.1  myozenin-1b isoform X1

      See identical proteins and their annotated locations for XP_005156340.1

      UniProtKB/TrEMBL
      A0A286Y919, A0A8M6Z1X3
      Related
      ENSDARP00000143456.1, ENSDART00000178687.2
      Conserved Domains (1) summary
      pfam05556
      Location:1251
      Calsarcin; Calcineurin-binding protein (Calsarcin)