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    TRPC7 transient receptor potential cation channel subfamily C member 7 [ Gallus gallus (chicken) ]

    Gene ID: 427641, updated on 17-Aug-2024

    Summary

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    Symbol
    TRPC7provided by CGNC
    Full Name
    transient receptor potential cation channel subfamily C member 7provided by CGNC
    Primary source
    CGNC:4730
    See related
    Ensembl:ENSGALG00010015802
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See TRPC7 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 13 NC_052544.1 (14594072..14659063)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 13 NC_052585.1 (14606238..14671248)

    Chromosome 13 - NC_052544.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121106741 Neighboring gene SPARC/osteonectin, cwcv and kazal like domains proteoglycan 1 Neighboring gene uncharacterized LOC101749758 Neighboring gene uncharacterized LOC101749540 Neighboring gene SMAD family member 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Native TRPC7 channel activation by an inositol trisphosphate receptor-dependent mechanism. Vazquez G, et al. J Biol Chem, 2006 Sep 1. PMID 16822861, Free PMC Article
    2. The role of canonical transient receptor potential 7 in B-cell receptor-activated channels. Lievremont JP, et al. J Biol Chem, 2005 Oct 21. PMID 16123040

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. TRPC7 channel activation occurs by an inositol trisphosphate receptor-dependent mechanism
      Title: Native TRPC7 channel activation by an inositol trisphosphate receptor-dependent mechanism.
    2. in B-lymphocytes, TRPC7 appears to participate in the formation of ion channels that could be activated by phospholipase C-linked receptors
      Title: The role of canonical transient receptor potential 7 in B-cell receptor-activated channels.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables inositol 1,4,5 trisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables store-operated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in manganese ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cytosolic calcium ion concentration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cation channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    short transient receptor potential channel 7
    XP_040503162.1
    XP_040503163.1
    XP_040538906.1
    XP_040538907.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      14594072..14659063
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040647228.2 → XP_040503162.1  short transient receptor potential channel 7 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z017
      Related
      ENSGALP00010021953.1, ENSGALT00010038043.1
      Conserved Domains (2) summary
      TIGR00870
      Location:27 → 840
      trp; transient-receptor-potential calcium channel protein
      sd00045
      Location:77 → 108
      ANK; ANK repeat [structural motif]

    2. XM_040647229.2 → XP_040503163.1  short transient receptor potential channel 7 isoform X2

      UniProtKB/TrEMBL
      F1NYQ1
      Related
      ENSGALP00010021958.1, ENSGALT00010038048.1
      Conserved Domains (2) summary
      TIGR00870
      Location:27 → 822
      trp; transient-receptor-potential calcium channel protein
      sd00045
      Location:77 → 108
      ANK; ANK repeat [structural motif]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      14606238..14671248
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040682972.2 → XP_040538906.1  short transient receptor potential channel 7 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z017
      Conserved Domains (2) summary
      TIGR00870
      Location:27 → 840
      trp; transient-receptor-potential calcium channel protein
      sd00045
      Location:77 → 108
      ANK; ANK repeat [structural motif]

    2. XM_040682973.2 → XP_040538907.1  short transient receptor potential channel 7 isoform X2

      UniProtKB/TrEMBL
      F1NYQ1
      Conserved Domains (2) summary
      TIGR00870
      Location:27 → 822
      trp; transient-receptor-potential calcium channel protein
      sd00045
      Location:77 → 108
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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