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    KIRREL1 kirre like nephrin family adhesion molecule 1 [ Gallus gallus (chicken) ]

    Gene ID: 425302, updated on 17-Aug-2024

    Summary

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    Official Symbol
    KIRREL1provided by CGNC
    Official Full Name
    kirre like nephrin family adhesion molecule 1provided by CGNC
    Primary source
    CGNC:52412
    See related
    Ensembl:ENSGALG00010027600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    KIRREL
    Orthologs
    human mouse all
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    Genomic context

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    See KIRREL1 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 25 NC_052556.1 (1157635..1177510, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 25 NC_052597.1 (1158642..1178667, complement)

    Chromosome 25 - NC_052556.1Genomic Context describing neighboring genes Neighboring gene SLAM family member 8 Neighboring gene T-lymphocyte surface antigen Ly-9-like Neighboring gene uncharacterized LOC101750757 Neighboring gene natural killer cell receptor 2B4-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cell adhesion molecule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell-cell junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    kin of IRRE-like protein 1
    Names
    kin of IRRE like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052556.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      1157635..1177510 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_423078.8 → XP_423078.3  kin of IRRE-like protein 1

      UniProtKB/TrEMBL
      A0A1D5PQ46
      Related
      ENSGALP00010040909.1, ENSGALT00010066861.1
      Conserved Domains (5) summary
      cd05898
      Location:391 → 488
      Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
      smart00410
      Location:314 → 389
      IG_like; Immunoglobulin like
      pfam07679
      Location:22 → 116
      I-set; Immunoglobulin I-set domain
      pfam13895
      Location:316 → 389
      Ig_2; Immunoglobulin domain
      cl11960
      Location:138 → 219
      Ig; Immunoglobulin domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052597.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1158642..1178667 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040691021.2 → XP_040546955.1  kin of IRRE-like protein 1

      UniProtKB/TrEMBL
      A0A1D5PQ46
      Conserved Domains (3) summary
      smart00409
      Location:27 → 116
      IG; Immunoglobulin
      cd00096
      Location:392 → 396
      Ig; Ig strand A [structural motif]
      cl11960
      Location:391 → 488
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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