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    EFHD1 EF-hand domain family member D1 [ Gallus gallus (chicken) ]

    Gene ID: 424741, updated on 17-Aug-2024

    Summary

    Symbol
    EFHD1provided by CGNC
    Full Name
    EF-hand domain family member D1provided by CGNC
    Primary source
    CGNC:52247
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
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    Genomic context

    See EFHD1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 9 NC_052540.1 (586102..601589)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 9 NC_052581.1 (454289..469767)

    Chromosome 9 - NC_052540.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene GRB10 interacting GYF protein 2 Neighboring gene Potassium inwardly rectifying channel subfamily J member 13 Neighboring gene secondary ossification center associated regulator of chondrocyte maturation

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    EF-hand domain-containing protein D1
    Names
    EF hand-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001031773.1NP_001026943.1  EF-hand domain-containing protein D1

      See identical proteins and their annotated locations for NP_001026943.1

      Status: PROVISIONAL

      Source sequence(s)
      AY971655
      UniProtKB/TrEMBL
      Q49B65
      Conserved Domains (1) summary
      cd00051
      Location:93151
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052540.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      586102..601589
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040705502.2XP_040561436.1  EF-hand domain-containing protein D1 isoform X4

      Conserved Domains (1) summary
      cl08302
      Location:240
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    2. XM_046898359.1XP_046754315.1  EF-hand domain-containing protein D1 isoform X4

    3. XM_046898357.1XP_046754313.1  EF-hand domain-containing protein D1 isoform X2

    4. XM_046898358.1XP_046754314.1  EF-hand domain-containing protein D1 isoform X3

    5. XM_046898356.1XP_046754312.1  EF-hand domain-containing protein D1 isoform X1

    6. XM_046898360.1XP_046754316.1  EF-hand domain-containing protein D1 isoform X4

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052581.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      454289..469767
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046923720.1XP_046779676.1  EF-hand domain-containing protein D1 isoform X4

    2. XM_046923719.1XP_046779675.1  EF-hand domain-containing protein D1 isoform X3

    3. XM_046923717.1XP_046779673.1  EF-hand domain-containing protein D1 isoform X1

    4. XM_046923718.1XP_046779674.1  EF-hand domain-containing protein D1 isoform X2

    5. XM_046923721.1XP_046779677.1  EF-hand domain-containing protein D1 isoform X4