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    LAMC1 laminin subunit gamma 1 [ Gallus gallus (chicken) ]

    Gene ID: 424442, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LAMC1provided by CGNC
    Official Full Name
    laminin subunit gamma 1provided by CGNC
    Primary source
    CGNC:3417
    See related
    Ensembl:ENSGALG00010011447
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See LAMC1 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (7469621..7521103)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (7481529..7533041)

    Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene microRNA 1618 Neighboring gene uncharacterized LOC121111370 Neighboring gene microRNA 1655 Neighboring gene laminin subunit gamma 2 Neighboring gene nicotinamide nucleotide adenylyltransferase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Entactin and laminin gamma 1-chain gene expression in the early chick embryo. Zagris N, et al. Int J Dev Biol, 2005. PMID 15744670
    2. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables extracellular matrix structural constituent IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    laminin subunit gamma-1
    Names
    laminin, gamma 1 (formerly LAMB2)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      7469621..7521103
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040705270.2 → XP_040561204.1  laminin subunit gamma-1

      UniProtKB/TrEMBL
      A0A8V0YB27, A0A8V0YHZ7
      Related
      ENSGALP00010015644.1, ENSGALT00010027390.1
      Conserved Domains (5) summary
      smart00136
      Location:38 → 278
      LamNT; Laminin N-terminal domain (domain VI)
      smart00180
      Location:929 → 974
      EGF_Lam; Laminin-type epidermal growth factor-like domai
      smart00281
      Location:547 → 672
      LamB; Laminin B domain
      COG1196
      Location:1032 → 1590
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd00055
      Location:438 → 487
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      7481529..7533041
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040677530.2 → XP_040533464.1  laminin subunit gamma-1

      UniProtKB/TrEMBL
      A0A8V0YB27
      Conserved Domains (5) summary
      smart00136
      Location:38 → 278
      LamNT; Laminin N-terminal domain (domain VI)
      smart00180
      Location:929 → 974
      EGF_Lam; Laminin-type epidermal growth factor-like domai
      smart00281
      Location:547 → 672
      LamB; Laminin B domain
      COG1196
      Location:1032 → 1590
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd00055
      Location:438 → 487
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001012924.1: Suppressed sequence

      Description
      NM_001012924.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.
    Nucleotide Protein Strain
    Heading Accession and Version

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