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    MARCHF5 membrane associated ring-CH-type finger 5 [ Gallus gallus (chicken) ]

    Gene ID: 423815, updated on 10-Oct-2024

    Summary

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    Official Symbol
    MARCHF5provided by CGNC
    Official Full Name
    membrane associated ring-CH-type finger 5provided by CGNC
    Primary source
    CGNC:5196
    See related
    Ensembl:ENSGALG00010021484
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    MARCH5; Mar-05; MARCH-V
    Orthologs
    human mouse all
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    Genomic context

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    See MARCHF5 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 6 NC_052537.1 (21616825..21639548, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 6 NC_052578.1 (21507882..21530618, complement)

    Chromosome 6 - NC_052537.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 11 Neighboring gene insulin degrading enzyme Neighboring gene cytoplasmic polyadenylation element binding protein 3 Neighboring gene uncharacterized LOC101750135 Neighboring gene uncharacterized LOC107053702 Neighboring gene B-TFIID TATA-box binding protein associated factor 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptome analysis for the chicken based on 19,626 finished cDNA sequences and 485,337 expressed sequence tags. Hubbard SJ, et al. Genome Res, 2005 Jan. PMID 15590942, Free PMC Article
    2. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase MARCHF5
    Names
    E3 ubiquitin-protein ligase MARCH5
    RING-type E3 ubiquitin transferase MARCH5
    RING-type E3 ubiquitin transferase MARCHF5
    membrane-associated RING finger protein 5
    membrane-associated RING-CH protein V
    membrane-associated ring finger (C3HC4) 5
    NP_001012924.1
    XP_046776236.1
    XP_046798881.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001012906.2 → NP_001012924.1  E3 ubiquitin-protein ligase MARCHF5

      See identical proteins and their annotated locations for NP_001012924.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000232
      UniProtKB/Swiss-Prot
      Q5ZJ41
      UniProtKB/TrEMBL
      A0A8V0ZIF1
      Related
      ENSGALP00010031105.1, ENSGALT00010052094.1
      Conserved Domains (1) summary
      cd16701
      Location:15 → 75
      RING_CH-C4HC3_MARCH5; RING-CH finger, H2 subclass (C4HC3-type), found in membrane-associated RING-CH5 (MARCH5)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052537.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      21616825..21639548 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046942925.1 → XP_046798881.1  E3 ubiquitin-protein ligase MARCHF5 isoform X1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052578.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      21507882..21530618 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046920280.1 → XP_046776236.1  E3 ubiquitin-protein ligase MARCHF5 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5ZJ41.1 GenPept UniProtKB/Swiss-Prot:Q5ZJ41

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials