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    MAP1LC3C microtubule associated protein 1 light chain 3 gamma [ Gallus gallus (chicken) ]

    Gene ID: 421504, updated on 10-Oct-2024

    Summary

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    Symbol
    MAP1LC3Cprovided by CGNC
    Full Name
    microtubule associated protein 1 light chain 3 gammaprovided by CGNC
    Primary source
    CGNC:8165
    See related
    Ensembl:ENSGALG00010008400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human all
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    Genomic context

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    See MAP1LC3C in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (35386536..35388294)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (35289992..35291952)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene phospholipase D family member 5 Neighboring gene uncharacterized LOC124417801 Neighboring gene microRNA mir-1784b Neighboring gene microRNA 1784 Neighboring gene uncharacterized LOC421506 Neighboring gene exonuclease 1 Neighboring gene WD repeat domain 64

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in autophagosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in autophagy of mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to nitrogen starvation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in macroautophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in autophagosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in autophagosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    microtubule-associated proteins 1A/1B light chain 3C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      35386536..35388294
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_419549.8 → XP_419549.2  microtubule-associated proteins 1A/1B light chain 3C isoform X1

      See identical proteins and their annotated locations for XP_419549.2

      UniProtKB/TrEMBL
      A0A8V0XY77
      Related
      ENSGALP00010011649.1, ENSGALT00010020101.1
      Conserved Domains (1) summary
      cd17236
      Location:13 → 125
      Ubl_ATG8_MAP1LC3C; ubiquitin-like (Ubl) domain found in microtubule associate protein 1 light chain 3C (MAPLC3C)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      35289992..35291952
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040666871.2 → XP_040522805.1  microtubule-associated proteins 1A/1B light chain 3C isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y6K8
      Conserved Domains (2) summary
      PRK14086
      Location:9 → 85
      dnaA; chromosomal replication initiator protein DnaA
      cl28922
      Location:64 → 177
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    2. XM_040666872.2 → XP_040522806.2  microtubule-associated proteins 1A/1B light chain 3C isoform X3

    3. XM_040666873.2 → XP_040522807.1  microtubule-associated proteins 1A/1B light chain 3C isoform X1

      UniProtKB/TrEMBL
      A0A8V0XY77
      Conserved Domains (1) summary
      cd17236
      Location:13 → 125
      Ubl_ATG8_MAP1LC3C; ubiquitin-like (Ubl) domain found in microtubule associate protein 1 light chain 3C (MAPLC3C)
    Nucleotide Protein Strain
    Heading Accession and Version

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