ATG3 autophagy related 3 [Gallus gallus (chicken)] - Gene

Summary

Symbol: ATG3provided by CGNC
Full Name: autophagy related 3provided by CGNC
Primary source: CGNC:11313
See related: Ensembl:ENSGALG00010005261
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as: APG3L
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	1	NC_052532.1 (83833220..83856742)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	1	NC_052573.1 (83885063..83908622)

Chromosome 1 - NC_052532.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables Atg8-family ligase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in autophagosome assembly	IEA Inferred from Electronic Annotation more info	PubMed
involved_in autophagy of mitochondrion	IEA Inferred from Electronic Annotation more info	PubMed
involved_in nucleophagy	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of cytoplasmic ubiquitin ligase complex	IEA Inferred from Electronic Annotation more info	PubMed
located_in cytosol	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: ubiquitin-like-conjugating enzyme ATG3

Names: ATG3 autophagy related 3 homolog; Apg3p

NP_001264999.1

EC 2.3.2.-

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001278070.2 → NP_001264999.1 ubiquitin-like-conjugating enzyme ATG3

See identical proteins and their annotated locations for NP_001264999.1

Status: VALIDATED

Source sequence(s)

JAENSK010000019

UniProtKB/TrEMBL

A0A8V0XQ92

Related

ENSGALP00010007030.1, ENSGALT00010012466.1

Conserved Domains (3) summary

pfam03986
Location:8 → 133

Autophagy_N; Autophagocytosis associated protein (Atg3), N-terminal domain

pfam03987
Location:203 → 264

Autophagy_act_C; Autophagocytosis associated protein, active-site domain

pfam10381
Location:285 → 308

Autophagy_C; Autophagocytosis associated protein C-terminal