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    WDR5B WD repeat domain 5B [ Gallus gallus (chicken) ]

    Gene ID: 417144, updated on 10-Oct-2024

    Summary

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    Official Symbol
    WDR5Bprovided by CGNC
    Official Full Name
    WD repeat domain 5Bprovided by CGNC
    Primary source
    CGNC:50449
    See related
    Ensembl:ENSGALG00010028888
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    WDR5
    Orthologs
    human mouse all
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    Genomic context

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    See WDR5B in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 17 NC_052548.1 (7803819..7815726)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 17 NC_052589.1 (7214884..7226732)

    Chromosome 17 - NC_052548.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100858426 Neighboring gene bromodomain containing 3 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene ly6/PLAUR domain-containing protein 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Wdr5 is required for chick skeletal development. Zhu S, et al. J Bone Miner Res, 2010 Nov. PMID 20533303, Free PMC Article
    2. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Wdr5 is required for endochondral bone formation.
      Title: Wdr5 is required for chick skeletal development.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Set1C/COMPASS complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WD repeat-containing protein 5
    Names
    WD repeat domain 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001006198.2 → NP_001006198.2  WD repeat-containing protein 5

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000308
      UniProtKB/TrEMBL
      Q5ZJE6
      Related
      ENSGALP00010042997.1, ENSGALT00010069871.1
      Conserved Domains (2) summary
      cd00200
      Location:37 → 331
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:48 → 85
      7WD40; WD40 repeat [structural motif]

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      7803819..7815726
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040649056.2 → XP_040504990.1  WD repeat-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      Q5ZJE6
      Related
      ENSGALP00010042995.1, ENSGALT00010069869.1
      Conserved Domains (2) summary
      cd00200
      Location:37 → 331
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:48 → 85
      7WD40; WD40 repeat [structural motif]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      7214884..7226732
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046928916.1 → XP_046784872.1  WD repeat-containing protein 5 isoform X1

    2. XM_046928915.1 → XP_046784871.1  WD repeat-containing protein 5 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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