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    APMAP adipocyte plasma membrane associated protein [ Gallus gallus (chicken) ]

    Gene ID: 416715, updated on 17-Aug-2024

    Summary

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    Official Symbol
    APMAPprovided by CGNC
    Official Full Name
    adipocyte plasma membrane associated proteinprovided by CGNC
    Primary source
    CGNC:6565
    See related
    Ensembl:ENSGALG00010018892
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    BSCv; C20orf3; C3H20ORF3
    Orthologs
    human mouse all
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    Genomic context

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    See APMAP in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (15523370..15536385, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (15437506..15450528, complement)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene synapse differentiation inducing 1 Neighboring gene uncharacterized LOC121110394 Neighboring gene cystatin F Neighboring gene acyl-CoA synthetase short chain family member 1A Neighboring gene tau tubulin kinase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables strictosidine synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    adipocyte plasma membrane-associated protein
    Names
    protein BSCv

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001006177.2 → NP_001006177.1  adipocyte plasma membrane-associated protein

      See identical proteins and their annotated locations for NP_001006177.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000062
      UniProtKB/Swiss-Prot
      Q5ZIF1
      Related
      ENSGALP00010027233.1, ENSGALT00010045675.1
      Conserved Domains (2) summary
      COG3386
      Location:68 → 319
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]
      cl22863
      Location:200 → 287
      Str_synth; Strictosidine synthase

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      15523370..15536385 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025148593.3 → XP_025004361.2  adipocyte plasma membrane-associated protein isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZF82
      Related
      ENSGALP00010027229.1, ENSGALT00010045669.1
      Conserved Domains (2) summary
      COG3386
      Location:68 → 319
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]
      cl22863
      Location:200 → 287
      Str_synth; Strictosidine synthase

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      15437506..15450528 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046913357.1 → XP_046769313.1  adipocyte plasma membrane-associated protein isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5ZIF1.1 GenPept UniProtKB/Swiss-Prot:Q5ZIF1

    Gene LinkOut

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