RT1-CE14 RT1 class I, locus CE14 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: RT1-CE14provided by RGD
Official Full Name: RT1 class I, locus CE14provided by RGD
Primary source: RGD:1359342
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
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Genomic context

Location:: 20p12

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	20	NC_086038.1 (3301813..3305472, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	20	NC_051355.1 (3296654..3300795, complement)

Chromosome 20 - NC_086038.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

RH133561 (e-PCR)
- UniSTS:216844

RH132677 (e-PCR)
- UniSTS:215960

AI408317 (e-PCR)
- UniSTS:260514

Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in antigen processing and presentation of peptide antigen via MHC class I	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of MHC class I protein complex	IEA Inferred from Electronic Annotation more info
located_in lumenal side of endoplasmic reticulum membrane	IEA Inferred from Electronic Annotation more info
located_in phagocytic vesicle membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: RT1 class I, locus CE14

Names: RT1 class I, CE14

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

NR_172019.1 RNA Sequence

Status: VALIDATED

Source sequence(s)

BC083799

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

NC_086038.1 Reference GRCr8

Range

3301813..3305472 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

NM_001008837.1: Suppressed sequence

Description

NM_001008837.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.
NM_001033985.1: Suppressed sequence

Description

NM_001033985.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.