U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    MSX2 msh homeobox 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 403663, updated on 17-Aug-2024

    Summary

    Official Symbol
    MSX2provided by VGNC
    Official Full Name
    msh homeobox 2provided by VGNC
    Primary source
    VGNC:VGNC:43455
    See related
    Ensembl:ENSCAFG00845000450
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See MSX2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 4 NC_051808.1 (38376184..38380830, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 4 NC_006586.4 (37948799..37953445, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 4 NC_049225.1 (38891167..38895822, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 4 NC_049264.1 (38192821..38197476, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 4 NC_049745.1 (38380991..38385645, complement)

    Chromosome 4 - NC_051808.1Genomic Context describing neighboring genes Neighboring gene lymphokine-activated killer T-cell-originated protein kinase-like Neighboring gene uncharacterized LOC119871632 Neighboring gene uncharacterized LOC106558689 Neighboring gene uncharacterized LOC111095712

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    homeobox protein MSX-2
    Names
    homeobox protein Hox-8
    msh homeo box homolog 2
    msh homeobox homolog 2
    muscle segmentation homologue (MSX2)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001003098.2NP_001003098.1  homeobox protein MSX-2

      See identical proteins and their annotated locations for NP_001003098.1

      Status: PROVISIONAL

      Source sequence(s)
      AJ277753
      UniProtKB/Swiss-Prot
      Q9GK08
      UniProtKB/TrEMBL
      A0A8C0KF78
      Related
      ENSCAFP00845000523.1, ENSCAFT00845000718.1
      Conserved Domains (1) summary
      pfam00046
      Location:145198
      Homeobox; Homeobox domain

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051808.1 Reference ROS_Cfam_1.0

      Range
      38376184..38380830 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049264.1 Alternate UMICH_Zoey_3.1

      Range
      38192821..38197476 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049745.1 Alternate UNSW_CanFamBas_1.0

      Range
      38380991..38385645 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049225.1 Alternate UU_Cfam_GSD_1.0

      Range
      38891167..38895822 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006586.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      37948799..37953445 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)