SLC35C1 solute carrier family 35 member C1 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: SLC35C1provided by VGNC
Official Full Name: solute carrier family 35 member C1provided by VGNC
Primary source: VGNC:VGNC:46368
See related: Ensembl:ENSCAFG00845029632
Gene type: protein coding
RefSeq status: INFERRED
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as: GDP-Fuc-Tr
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 18

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	18	NC_051822.1 (44259009..44267136, complement)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	18	NC_006600.4 (42333209..42337886, complement)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	18	NC_049239.1 (44030651..44035359, complement)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	18	NC_049278.1 (43745326..43750001, complement)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	18	NC_049759.1 (43298619..43303287, complement)

Chromosome 18 - NC_051822.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables antiporter activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in GDP-fucose import into Golgi lumen	IEA Inferred from Electronic Annotation more info	PubMed
involved_in protein O-linked fucosylation	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in Golgi apparatus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: GDP-fucose transporter 1

Names: GDP-fucose transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001197189.1 → NP_001184118.1 GDP-fucose transporter 1

Status: INFERRED

Source sequence(s)

JAAUVH010000176

UniProtKB/TrEMBL

A0A8I3Q1E5, A0A8P0NPU5

Conserved Domains (1) summary

pfam03151
Location:39 → 303

TPT; Triose-phosphate Transporter family

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051822.1 Reference ROS_Cfam_1.0

Range

44259009..44267136 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038423366.1 → XP_038279294.1 GDP-fucose transporter 1 isoform X1

UniProtKB/TrEMBL

A0A8I3QV35, A0A8P0PR46

Related

ENSCAFP00845041177.1, ENSCAFT00845052483.1

Conserved Domains (1) summary

cl26744
Location:26 → 290

TPT; Triose-phosphate Transporter family
XM_038423367.1 → XP_038279295.1 GDP-fucose transporter 1 isoform X1

UniProtKB/TrEMBL

A0A8I3QV35, A0A8P0PR46

Conserved Domains (1) summary

cl26744
Location:26 → 290

TPT; Triose-phosphate Transporter family