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    MCT7 tryptase [ Sus scrofa (pig) ]

    Gene ID: 397389, updated on 16-Nov-2023

    Summary

    Gene symbol
    MCT7
    Gene description
    tryptase
    See related
    Ensembl:ENSSSCG00000035337
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Also known as
    PMCT7; TPSB1
    Expression
    Broad expression in ovary (RPKM 30.4), lung (RPKM 19.8) and 5 other tissues See more
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    Genomic context

    See MCT7 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 3 NC_010445.4 (40616642..40619148, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) Unplaced Scaffold NW_003538888.1 (1..241)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) Unplaced Scaffold NW_003541176.1 (1393..2680)

    Chromosome 3 - NC_010445.4Genomic Context describing neighboring genes Neighboring gene tryptase Neighboring gene uncharacterized LOC110259949 Neighboring gene tryptase-like Neighboring gene calcium voltage-gated channel subunit alpha1 H

    Genomic regions, transcripts, and products

    Expression

    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    General protein information

    Preferred Names
    tryptase
    NP_999356.1
    XP_020941517.1
    XP_020941518.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_214191.1NP_999356.1  tryptase precursor

      See identical proteins and their annotated locations for NP_999356.1

      Status: PROVISIONAL

      Source sequence(s)
      AB038652
      UniProtKB/Swiss-Prot
      Q9N2D1
      UniProtKB/TrEMBL
      A0A5S8LA00
      Related
      ENSSSCP00000055133.3, ENSSSCT00000045510.3
      Conserved Domains (2) summary
      smart00020
      Location:31267
      Tryp_SPc; Trypsin-like serine protease
      cd00190
      Location:31269
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010445.4 Reference Sscrofa11.1 Primary Assembly

      Range
      40616642..40619148 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021085858.1XP_020941517.1  tryptase isoform X1

      UniProtKB/TrEMBL
      A0A4X1TIY9
      Conserved Domains (1) summary
      cd00190
      Location:51289
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    2. XM_021085859.1XP_020941518.1  tryptase isoform X2

      UniProtKB/TrEMBL
      A0A286ZXM3, A0A287BGF5, A0A5S8LA00
      Related
      ENSSSCP00000026057.4, ENSSSCT00000026740.4
      Conserved Domains (1) summary
      cd00190
      Location:31269
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...